Escherichia coli B16EC0630 |
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Putative Escherichia coli B16EC0630 RM systems
Ref: Yoon,E.-J. et al. unpublished
REBASE ref # 33366
| Sequence length: | GenBank #: | |
| Chromosome: | 5,126,127 bp | CP088786 |
| plasmid pB16EC0630-2: | 137,594 bp | CP088787 |
| plasmid pB16EC0630-4: | 91,410 bp | CP088789 |
REBASE acronym: EcoC0630
Org_num: 53610
All begin LQR11_
| Type I | ||||
|---|---|---|---|---|
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| 21325 | adenine/cytosine-specific restriction | |||
| 21330 | R | EcosS1ORF16790P (99% identity) | CCANNNNNNNCTTC | EcoC0630ORF21335P |
| 21335 | M | M.EcosS1ORF16790P (100% identity) | CCANNNNNNNCTTC | M.EcoC0630ORF21335P |
| 21340 | S | S.EcosS1ORF16790P (100% identity) | CCANNNNNNNCTTC | S.EcoC0630ORF21335P |
| 21345 | endoribonuclease SymE | |||
| plasmid pB16EC0630-2 | ||||
| 25470 | type II toxin-antitoxin system Phd/YefM family | |||
| 24645 | M | M.SenceORFJP (99% identity) | CAAYNNNNNCTGG | M.EcoC0630ORF24645P |
| 24650 | S | S.SenBR076ORFFP (100% identity) | CAAYNNNNNCTGG | S.EcoC0630ORF24645P |
| 24655 | R | KpnKPH1ORF27575P (100% identity) | CAAYNNNNNCTGG | EcoC0630ORF24645P |
| 24660 | IS1-like element IS1A family transposase | |||
| Type II | ||||
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| 2625 | DUF2556 family protein | |||
| 2630 | M | M.EcosS1ORF18905P (100% identity) | ATGCAT | M.EcoC0630ORF2630P |
| 2635 | DNA-binding transcriptional regulator Fis | |||
| 9230 | replication endonuclease | |||
| 9235 | M | M.Sbo812ORFEP (100% identity) | M.EcoC0630ORF9235P | |
| 9240 | 330 aa hypothetical protein | |||
| 9245 | R | EcosEC21ORF7960P (100% identity) | EcoC0630ORF9235P | |
| 9250 | phage portal protein | |||
| 9755 | 71 aa hypothetical protein | |||
| 9760 | M | M.Sen21974ORF23385P (100% identity) | M.EcoC0630ORF9760P | |
| 9765 | 145 aa hypothetical protein | |||
| 10430 | HD domain-containing protein | |||
| 10435 | M | M.SflSTLE3DcmP (100% identity) | CCWGG | M.EcoC0630DcmP |
| 10440 | V | V.SflSTLE3DcmP (100% identity) | CCWGG | V.EcoC0630DcmP |
| 10445 | drug/metabolite exporter YedA | |||
| plasmid pB16EC0630-2 | ||||
| 24710 | 103 aa hypothetical protein | |||
| 24715 | M | M.UbapRSB107ORFAP (100% identity) | SAY | M.EcoC0630ORF24715P |
| 24720 | 73 aa hypothetical protein | |||
| plasmid pB16EC0630-4 | ||||
| 26420 | tellurite/colicin resistance protein | |||
| 26435 | M | M.Sen10729ORF23295P (100% identity) | M.EcoC0630ORF26435P | |
| 26440 | recombination-associated protein RdgC | |||
| Type IV | ||||
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| 21320 | GTPase | |||
| 21325 | R | EcosS1MrrP (100% identity) | EcoC0630MrrP | |
| 21330 | type I restriction-modification system | |||