Escherichia coli B16EC0820 |
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Putative Escherichia coli B16EC0820 RM systems
Ref: Yoon,E.-J. et al. unpublished
REBASE ref # 33366
| Sequence length: | GenBank #: | |
| Chromosome: | 5,088,065 bp | CP088768 |
| plasmid pB16EC0820-3: | 106,182 bp | CP088770 |
REBASE acronym: EcoC0820
Org_num: 53616
All begin LQR00_
| Type I | ||||
|---|---|---|---|---|
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| 19430 | type IV toxin-antitoxin system AbiEi family | |||
| 19435 | R | EcosS9ORF4930P (100% identity) | AAAGNNNNGTT | EcoC0820ORF19440P |
| 19440 | M | M.EcosS9ORF4930P (100% identity) | AAAGNNNNGTT | M.EcoC0820ORF19440P |
| 19445 | S | S.EcosS9ORF4930P (100% identity) | AAAGNNNNGTT | S.EcoC0820ORF19440P |
| 19450 | ash family protein | |||
| 21255 | restriction endonuclease | |||
| 21260 | M | M.Ecou021ORF19870P (100% identity) | RTACNNNNGTG | M.EcoC0820ORF21260P |
| 21265 | S | S.Ecou021ORF19870P (100% identity) | RTACNNNNGTG | S.EcoC0820ORF21260P |
| 21270 | R | Ecou021ORF19870P (100% identity) | RTACNNNNGTG | EcoC0820ORF21260P |
| 21275 | endoribonuclease SymE | |||
| Type II | ||||
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| 2695 | DUF2556 family protein | |||
| 2700 | M | M.PmeBin470ORFAP (100% identity) | ATGCAT | M.EcoC0820ORF2700P |
| 2705 | DNA-binding transcriptional regulator Fis | |||
| 10105 | phosphohydrolase | |||
| 10110 | M | M.EcosS9DcmP (100% identity) | CCWGG | M.EcoC0820DcmP |
| 10115 | V | V.SflC32DcmP (74% identity) | CCWGG | V.EcoC0820DcmP |
| 10120 | drug/metabolite exporter YedA | |||
| 13650 | DUF3927 family protein | |||
| 13665 | M | M.EcosS9ORF10680P (100% identity) | A | M.EcoC0820ORF13665P |
| 13670 | TrmB family transcriptional regulator | |||
| 15925 | helix-turn-helix domain-containing protein | |||
| 15930 | M | M.KpnYN1ORFGP (89% identity) | M.EcoC0820ORF15930P | |
| 15935 | 71 aa hypothetical protein | |||
| 21605 | McrC family protein | |||
| 21610 | R | EcosS9ORF2810P (100% identity) | GGTCTC | EcoC0820ORF21615P |
| 21615 | M | M2.EcosS9ORF2810P (100% identity) | GGTCTC | M1.EcoC0820ORF21615P |
| 21620 | M | M1.EcosS9ORF2810P (100% identity) | GGTCTC | M2.EcoC0820ORF21615P |
| 21625 | helix-turn-helix domain-containing protein | |||
| 23410 | phage lysis protein EssD | |||
| 23415 | M | M.Sso63633ORF22290P (100% identity) | M.EcoC0820ORF23415P | |
| 23420 | 67 aa hypothetical protein | |||
| 23445 | LexA family transcriptional regulator | |||
| 23450 | M | M.Sso30ORF925P (100% identity) | GATC | M.EcoC0820ORF23450P |
| 23455 | PerC family transcriptional regulator | |||
| plasmid pB16EC0820-3 | ||||
| 25450 | 103 aa hypothetical protein | |||
| 25455 | M | M.UbapRSB107ORFAP (100% identity) | SAY | M.EcoC0820ORF25455P |
| 25460 | 73 aa hypothetical protein | |||
| Type IV | ||||
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| 21595 | glycosyltransferase | |||
| 21600 | R | EcosS3McrBP (100% identity) | EcoC0820McrBP | |
| 21605 | R | EcosS9McrCP (100% identity) | EcoC0820McrCP | |
| 21610 | Alw26I/Eco31I/Esp3I family type II restriction | |||