Escherichia coli B16EC1050 |
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Putative Escherichia coli B16EC1050 RM systems
Ref: Yoon,E.-J. et al. unpublished
REBASE ref # 33366
| Sequence length: | GenBank #: | |
| Chromosome: | 5,170,848 bp | CP088734 |
| plasmid pB16EC1050-1: | 142,276 bp | CP088735 |
REBASE acronym: EcoC1050
Org_num: 53623
All begin LQT08_
| Type I | ||||
|---|---|---|---|---|
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| 21240 | adenine/cytosine-specific restriction | |||
| 21245 | R | EcosS1ORF16790P (100% identity) | CCANNNNNNNCTTC | EcoC1050ORF21250P |
| 21250 | M | M.EcosS1ORF16790P (100% identity) | CCANNNNNNNCTTC | M.EcoC1050ORF21250P |
| 21255 | S | S.EcosS1ORF16790P (100% identity) | CCANNNNNNNCTTC | S.EcoC1050ORF21250P |
| 21260 | endoribonuclease SymE | |||
| 22540 | SIR2 family protein | |||
| 22545 | S | S.Ecoi68ORF3737P (98% identity) | GGANNNNNNCTTT | S.EcoC1050ORF22550P |
| 22550 | M | M.Ecoi68ORF3737P (100% identity) | GGANNNNNNCTTT | M.EcoC1050ORF22550P |
| 22555 | R | EcoFu014ORF1555P (100% identity) | GGANNNNNNCTTT | EcoC1050ORF22550P |
| 22560 | IS3 family transposase | |||
| plasmid pB16EC1050-1 | ||||
| 25320 | type II toxin-antitoxin system Phd/YefM family | |||
| 25325 | M | M.SenceORFJP (99% identity) | M.EcoC1050ORF25325P | |
| 25330 | IS1-like element IS1A family transposase | |||
| Type II | ||||
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| 2600 | DUF2556 family protein | |||
| 2605 | M | M.EcosS1ORF18905P (100% identity) | ATGCAT | M.EcoC1050ORF2605P |
| 2610 | DNA-binding transcriptional regulator Fis | |||
| 9590 | 71 aa hypothetical protein | |||
| 9595 | M | M.Sen21974ORF23385P (100% identity) | M.EcoC1050ORF9595P | |
| 9600 | 145 aa hypothetical protein | |||
| 10260 | HD domain-containing protein | |||
| 10265 | M | M.SflSTLE3DcmP (100% identity) | CCWGG | M.EcoC1050DcmP |
| 10270 | V | V.SflSTLE3DcmP (100% identity) | CCWGG | V.EcoC1050DcmP |
| 10275 | drug/metabolite exporter YedA | |||
| plasmid pB16EC1050-1 | ||||
| 25380 | 103 aa hypothetical protein | |||
| 25385 | M | M.UbapRSB107ORFAP (100% identity) | SAY | M.EcoC1050ORF25385P |
| 25390 | 73 aa hypothetical protein | |||
| Type IV | ||||
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| 21235 | GTPase | |||
| 21240 | R | EcosS1MrrP (100% identity) | EcoC1050MrrP | |
| 21245 | type I restriction-modification system | |||