Escherichia coli B17EC0157 |
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Putative Escherichia coli B17EC0157 RM systems
Ref: Yoon,E.-J. et al. unpublished
REBASE ref # 33366
| Sequence length: | GenBank #: | |
| Chromosome: | 5,035,275 bp | CP088710 |
| plasmid pB17EC0157-1: | 156,309 bp | CP088711 |
REBASE acronym: EcoC0157
Org_num: 53630
All begin LQQ96_
| Type I | ||||
|---|---|---|---|---|
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| 18740 | type IV toxin-antitoxin system AbiEi family | |||
| 18745 | R | EcosS9ORF4930P (100% identity) | AAAGNNNNGTT | EcoC0157ORF18750P |
| 18750 | M | M.EcosS9ORF4930P (100% identity) | AAAGNNNNGTT | M.EcoC0157ORF18750P |
| 18755 | S | S.EcosS9ORF4930P (100% identity) | AAAGNNNNGTT | S.EcoC0157ORF18750P |
| 18760 | ash family protein | |||
| 20560 | restriction endonuclease | |||
| 20565 | M | M.Ecou021ORF19870P (100% identity) | RTACNNNNGTG | M.EcoC0157ORF20565P |
| 20570 | S | S.Ecou021ORF19870P (100% identity) | RTACNNNNGTG | S.EcoC0157ORF20565P |
| 20575 | R | Ecou021ORF19870P (100% identity) | RTACNNNNGTG | EcoC0157ORF20565P |
| 20580 | endoribonuclease SymE | |||
| 22440 | IS3-like element ISSen4 family transposase | |||
| 22445 | R | EcotcmA3ORF16550P (100% identity) | EcoC0157ORF22465P | |
| 22450 | DNA-protecting protein DprA | |||
| 22455 | RecQ family ATP-dependent DNA helicase | |||
| 22460 | S | S.EcotcmA3ORF16550P (100% identity) | S.EcoC0157ORF22465P | |
| 22465 | M | M.Pre393ORF2750P (100% identity) | M.EcoC0157ORF22465P | |
| 22470 | helix-turn-helix domain-containing protein | |||
| plasmid pB17EC0157-1 | ||||
| 25195 | IS1-like element IS1A family transposase | |||
| 25200 | R | KpnKPH1ORF27575P (100% identity) | CAAYNNNNNCTGG | EcoC0157ORF25210P |
| 25205 | S | S.SenBR076ORFFP (100% identity) | CAAYNNNNNCTGG | S.EcoC0157ORF25210P |
| 25210 | M | M.SenceORFJP (99% identity) | CAAYNNNNNCTGG | M.EcoC0157ORF25210P |
| 25215 | type II toxin-antitoxin system Phd/YefM family | |||
| Type II | ||||
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| 2530 | DUF2556 family protein | |||
| 2535 | M | M.PmeBin470ORFAP (100% identity) | ATGCAT | M.EcoC0157ORF2535P |
| 2540 | DNA-binding transcriptional regulator Fis | |||
| 9660 | phosphohydrolase | |||
| 9665 | M | M.EcosS9DcmP (100% identity) | CCWGG | M.EcoC0157DcmP |
| 9670 | V | V.SflC32DcmP (74% identity) | CCWGG | V.EcoC0157DcmP |
| 9675 | drug/metabolite exporter YedA | |||
| 13220 | DUF3927 family protein | |||
| 13235 | M | M.EcosS9ORF10680P (100% identity) | A | M.EcoC0157ORF13235P |
| 13240 | TrmB family transcriptional regulator | |||
| 15490 | helix-turn-helix domain-containing protein | |||
| 15495 | M | M.KpnYN1ORFGP (89% identity) | M.EcoC0157ORF15495P | |
| 15500 | 71 aa hypothetical protein | |||
| 20910 | McrC family protein | |||
| 20915 | R | EcosS9ORF2810P (100% identity) | GGTCTC | EcoC0157ORF20920P |
| 20920 | M | M2.EcosS9ORF2810P (100% identity) | GGTCTC | M1.EcoC0157ORF20920P |
| 20925 | M | M1.EcosS9ORF2810P (100% identity) | GGTCTC | M2.EcoC0157ORF20920P |
| 20930 | IS66-like element ISEc23 family transposase | |||
| plasmid pB17EC0157-1 | ||||
| 25135 | 73 aa hypothetical protein | |||
| 25140 | M | M.UbapRSB107ORFAP (100% identity) | SAY | M.EcoC0157ORF25140P |
| 25145 | 103 aa hypothetical protein | |||
| Type IV | ||||
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| 20900 | glycosyltransferase | |||
| 20905 | R | EcosS3McrBP (100% identity) | EcoC0157McrBP | |
| 20910 | R | EcosS9McrCP (100% identity) | EcoC0157McrCP | |
| 20915 | Alw26I/Eco31I/Esp3I family type II restriction | |||