Escherichia coli C16EC0050 |
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Putative Escherichia coli C16EC0050 RM systems
Ref: Yoon,E.-J. et al. unpublished
REBASE ref # 33366
| Sequence length: | GenBank #: | |
| Chromosome: | 4,989,644 bp | CP088683 |
| plasmid pC16EC0050-1: | 113,463 bp | CP088684 |
| plasmid pC16EC0050-2: | 85,804 bp | CP088685 |
REBASE acronym: EcoC0050
Org_num: 53642
All begin LQT94_
| Type I | ||||
|---|---|---|---|---|
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| 19420 | 322 aa hypothetical protein | |||
| 19425 | R | SflC32ORFCP (100% identity) | AAGNNNNNNNRTDCC | EcoC0050ORF19430P |
| 19430 | M | M.SspS13ORF3945P (100% identity) | AAGNNNNNNNRTDCC | M.EcoC0050ORF19430P |
| 19435 | S | S.SflC32ORFCP (100% identity) | AAGNNNNNNNRTDCC | S.EcoC0050ORF19430P |
| 19440 | endoribonuclease SymE | |||
| 23960 | transposase | |||
| 23965 | R | Ecoi012ORF18325P (100% identity) | EcoC0050ORF23970P | |
| 23970 | M | M.EcosEC2ORF410P (100% identity) | M.EcoC0050ORF23970P | |
| 23975 | S | S.EcosC41ORF22705P (100% identity) | S.EcoC0050ORF23970P | |
| 23980 | AAA family ATPase | |||
| Type II | ||||
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| 1955 | DUF2556 family protein | |||
| 1960 | M | M.SflC32ORFAP (100% identity) | ATGCAT | M.EcoC0050ORF1960P |
| 1965 | DNA-binding transcriptional regulator Fis | |||
| 6100 | DUF1382 family protein | |||
| 6105 | M | M.Eho218ORF16395P (100% identity) | GATC | M.EcoC0050ORF6105P |
| 6110 | PerC family transcriptional regulator | |||
| 9205 | phosphohydrolase | |||
| 9210 | M | M.SflC32DcmP (100% identity) | CCWGG | M.EcoC0050DcmP |
| 9215 | V | V.SflC32DcmP (74% identity) | CCWGG | V.EcoC0050DcmP |
| 9220 | drug/metabolite exporter YedA | |||
| 12630 | tellurite resistance protein | |||
| 12650 | M | M.SflC32ORFBP (100% identity) | M.EcoC0050ORF12650P | |
| 12655 | TrmB family transcriptional regulator | |||
| plasmid pC16EC0050-1 | ||||
| 24645 | 103 aa hypothetical protein | |||
| 24650 | M | M.UbapRSB107ORFAP (100% identity) | SAY | M.EcoC0050ORF24650P |
| 24655 | 73 aa hypothetical protein | |||
| plasmid pC16EC0050-2 | ||||
| 25160 | 73 aa hypothetical protein | |||
| 25165 | M | M.Sso2ORF26005P (100% identity) | M.EcoC0050ORF25165P | |
| 25170 | 103 aa hypothetical protein | |||