Escherichia coli B17EC0231 |
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Putative Escherichia coli B17EC0231 RM systems
Ref: Yoon,E.-J. et al. unpublished
REBASE ref # 33366
| Sequence length: | GenBank #: | |
| Chromosome: | 5,203,664 bp | CP088707 |
| plasmid pB17EC0231-1: | 145,324 bp | CP088708 |
REBASE acronym: EcoC0231
Org_num: 53631
All begin LQT36_
| Type I | ||||
|---|---|---|---|---|
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| 12465 | IS3 family transposase | |||
| 12470 | M | M.Ecos142ORF9685P (100% identity) | GATGNNNNNNTAC | M.EcoC0231ORF12470P |
| 12475 | S | S.Ecos142ORF9685P (100% identity) | GATGNNNNNNTAC | S.EcoC0231ORF12470P |
| 12480 | YecA family protein | |||
| 12485 | cold shock domain-containing protein | |||
| 12490 | R | Ecos142ORF9685P (100% identity) | GATGNNNNNNTAC | EcoC0231ORF12470P |
| 12495 | M48 family metallopeptidase | |||
| 23545 | adenine/cytosine-specific restriction | |||
| 23550 | R | EcosS1ORF16790P (100% identity) | CCANNNNNNNCTTC | EcoC0231ORF23555P |
| 23555 | M | M.EcosS1ORF16790P (100% identity) | CCANNNNNNNCTTC | M.EcoC0231ORF23555P |
| 23560 | S | S.EcosS1ORF16790P (100% identity) | CCANNNNNNNCTTC | S.EcoC0231ORF23555P |
| 23565 | endoribonuclease SymE | |||
| Type II | ||||
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| 4010 | cell division protein DamX | |||
| 4015 | M | M.SspPIBDamP (100% identity) | GATC | M.EcoC0231DamP |
| 4020 | ribulose-phosphate 3-epimerase | |||
| 4540 | DUF2556 family protein | |||
| 4545 | M | M.Ecos142ORF2405P (100% identity) | ATGCAT | M.EcoC0231ORF4545P |
| 4550 | DNA-binding transcriptional regulator Fis | |||
| 8945 | DUF1382 family protein | |||
| 8950 | M | M.SspPIBORF6330P (100% identity) | GATC | M.EcoC0231ORF8950P |
| 8955 | PerC family transcriptional regulator | |||
| 12205 | phosphohydrolase | |||
| 12210 | M | M.Ecos142DcmP (100% identity) | CCWGG | M.EcoC0231DcmP |
| 12215 | V | V.Ecos142DcmP (100% identity) | V.EcoC0231DcmP | |
| 12220 | drug/metabolite exporter YedA | |||
| 18085 | replication endonuclease | |||
| 18090 | M | M.SspS13ORF8710P (100% identity) | GATC | M.EcoC0231ORF18090P |
| 18095 | TraR/DksA family transcriptional regulator | |||
| 23305 | LexA family transcriptional regulator | |||
| 23310 | M | M.Eco3017ORF21355P (100% identity) | GATC | M.EcoC0231ORF23310P |
| 23315 | PerC family transcriptional regulator | |||
| plasmid pB17EC0231-1 | ||||
| 25535 | 103 aa hypothetical protein | |||
| 25540 | M | M.Ecowhn14ORF35P (100% identity) | M.EcoC0231ORF25540P | |
| 25545 | 73 aa hypothetical protein | |||
| Type IV | ||||
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| 23540 | GTPase | |||
| 23545 | R | Eco3017MrrP (100% identity) | EcoC0231MrrP | |
| 23550 | type I restriction-modification system | |||
| Orphan M | ||||
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| 18715 | NinE family protein | |||
| 18720 | M | M.SflN97ORF8425P (100% identity) | GATC | M.EcoC0231ORF18720P |
| 18725 | recombination protein NinB | |||