Escherichia coli C16EC0166 |
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Putative Escherichia coli C16EC0166 RM systems
Ref: Yoon,E.-J. et al. unpublished
REBASE ref # 33366
| Sequence length: | GenBank #: | |
| Chromosome: | 4,999,191 bp | CP088681 |
| plasmid pC16EC0166-1: | 134,264 bp | CP088682 |
REBASE acronym: EcoC0166
Org_num: 53643
All begin LQT10_
| Type I | ||||
|---|---|---|---|---|
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| 3445 | adenine/cytosine-specific restriction | |||
| 3450 | R | Ecoo241ORF21620P (100% identity) | AACNNNNNNGTGC | EcoC0166ORF3455P |
| 3455 | M | M.Ecos69ORF1130P (100% identity) | AACNNNNNNGTGC | M.EcoC0166ORF3455P |
| 3460 | S | S.Ecos69ORF1130P (100% identity) | AACNNNNNNGTGC | S.EcoC0166ORF3455P |
| 3465 | endoribonuclease SymE | |||
| Type II | ||||
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| 8860 | cell division protein DamX | |||
| 8865 | M | M.Ecos69DamP (100% identity) | GATC | M.EcoC0166DamP |
| 8870 | ribulose-phosphate 3-epimerase | |||
| 9390 | DUF2556 family protein | |||
| 9395 | M | M.Ecos69ORF20890P (100% identity) | ATGCAT | M.EcoC0166ORF9395P |
| 9400 | DNA-binding transcriptional regulator Fis | |||
| 16165 | phosphohydrolase | |||
| 16170 | M | M.Fnu048DcmP (100% identity) | CCWGG | M.EcoC0166DcmP |
| 16175 | V | V.Fnu048DcmP (100% identity) | V.EcoC0166DcmP | |
| 16180 | drug/metabolite exporter YedA | |||
| 20455 | NinE family protein | |||
| 20460 | M | M.SflWW1ORF7070P (100% identity) | GATC | M.EcoC0166ORF20460P |
| 20465 | recombination protein NinB | |||
| plasmid pC16EC0166-1 | ||||
| 24410 | 103 aa hypothetical protein | |||
| 24415 | M | M.UbapRSB107ORFAP (100% identity) | SAY | M.EcoC0166ORF24415P |
| 24420 | 73 aa hypothetical protein | |||
| Type IV | ||||
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| 3440 | GTPase | |||
| 3445 | R | Ssp28760MrrP (100% identity) | EcoC0166MrrP | |
| 3450 | type I restriction-modification system | |||
| 3465 | endoribonuclease SymE | |||
| 3470 | R | SenHNK130McrBP (100% identity) | EcoC0166McrBP | |
| 3475 | R | SenHNK130McrCP (100% identity) | EcoC0166McrCP | |