Escherichia coli C16EC0292 |
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Putative Escherichia coli C16EC0292 RM systems
Ref: Yoon,E.-J. et al. unpublished
REBASE ref # 33366
| Sequence length: | GenBank #: | |
| Chromosome: | 4,479,494 bp | CP088668 |
| plasmid pC16EC0292-1: | 730,445 bp | CP088669 |
| plasmid pC16EC0292-2: | 144,904 bp | CP088670 |
REBASE acronym: EcoC0292
Org_num: 53646
All begin LQT17_
| Type I | ||||
|---|---|---|---|---|
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| 18080 | endoribonuclease SymE | |||
| 18085 | S | S.Ecos69ORF1130P (100% identity) | AACNNNNNNGTGC | S.EcoC0292ORF18090P |
| 18090 | M | M.Ecos69ORF1130P (100% identity) | AACNNNNNNGTGC | M.EcoC0292ORF18090P |
| 18095 | R | Ecoo241ORF21620P (100% identity) | AACNNNNNNGTGC | EcoC0292ORF18090P |
| 18100 | adenine/cytosine-specific restriction | |||
| Type II | ||||
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| 4680 | drug/metabolite exporter YedA | |||
| 4685 | V | V.EcoC0930DcmP (100% identity) | V.EcoC0292DcmP | |
| 4690 | M | M.Fnu048DcmP (100% identity) | CCWGG | M.EcoC0292DcmP |
| 4695 | phosphohydrolase | |||
| 11960 | DNA-binding transcriptional regulator Fis | |||
| 11965 | M | M.Ecos69ORF20890P (100% identity) | ATGCAT | M.EcoC0292ORF11965P |
| 11970 | DUF2556 family protein | |||
| 12490 | ribulose-phosphate 3-epimerase | |||
| 12495 | M | M.Ecos69DamP (100% identity) | GATC | M.EcoC0292DamP |
| 12500 | cell division protein DamX | |||
| 15530 | replication endonuclease | |||
| 15535 | M | M.SflFF22ORF10P (100% identity) | GTCGAC | M.EcoC0292ORF15535P |
| 15540 | R | Eho218ORF15P (100% identity) | GTCGAC | EcoC0292ORF15535P |
| 15545 | phage portal protein | |||
| plasmid pC16EC0292-1 | ||||
| 25100 | recombination protein NinB | |||
| 25105 | M | M.SflWW1ORF7070P (100% identity) | GATC | M.EcoC0292ORF25105P |
| 25110 | NinE family protein | |||
| plasmid pC16EC0292-2 | ||||
| 25940 | 73 aa hypothetical protein | |||
| 25945 | M | M.Sfl0030ORFCP (100% identity) | SAY | M.EcoC0292ORF25945P |
| 25950 | 103 aa hypothetical protein | |||
| Type IV | ||||
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| 18070 | R | SenHNK130McrCP (100% identity) | EcoC0292McrCP | |
| 18075 | R | SenHNK130McrBP (100% identity) | EcoC0292McrBP | |
| 18080 | endoribonuclease SymE | |||
| 18095 | type I restriction-modification system | |||
| 18100 | R | Ssp28760MrrP (100% identity) | EcoC0292MrrP | |
| 18105 | GTPase | |||