Escherichia coli C16EC0786 |
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Putative Escherichia coli C16EC0786 RM systems
Ref: Yoon,E.-J. et al. unpublished
REBASE ref # 33366
| Sequence length: | GenBank #: | |
| Chromosome: | 5,037,647 bp | CP088641 |
| plasmid pC16EC0786-1: | 88,871 bp | CP088642 |
REBASE acronym: EcoC0786
Org_num: 53657
All begin LQT43_
| Type I | ||||
|---|---|---|---|---|
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| 5275 | ash family protein | |||
| 5280 | S | S.EcosS9ORF4930P (100% identity) | AAAGNNNNGTT | S.EcoC0786ORF5285P |
| 5285 | M | M.EcosS9ORF4930P (100% identity) | AAAGNNNNGTT | M.EcoC0786ORF5285P |
| 5290 | R | EcosS9ORF4930P (100% identity) | AAAGNNNNGTT | EcoC0786ORF5285P |
| 5295 | type IV toxin-antitoxin system AbiEi family | |||
| 23900 | type II toxin-antitoxin system RelB/DinJ family | |||
| 23905 | M | M.SenS0935ORF770P (99% identity) | ACYNNNNNNGTTC | M.EcoC0786ORF23905P |
| 23910 | S | S.Ecos53ORF20340P (100% identity) | ACYNNNNNNGTTC | S.EcoC0786ORF23905P |
| 23915 | R | Ecos53ORF20340P (100% identity) | ACYNNNNNNGTTC | EcoC0786ORF23905P |
| 23920 | 184 aa hypothetical protein | |||
| Type II | ||||
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| 3025 | 97 aa hypothetical protein | |||
| 3030 | R | Ecos19ORF20635P (100% identity) | EcoC0786ORF3030P | |
| 3035 | response regulator receiver domain | |||
| 3315 | helix-turn-helix domain-containing protein | |||
| 3320 | M | M1.EcosS9ORF2810P (100% identity) | GGTCTC | M1.EcoC0786ORF3320P |
| 3325 | M | M2.EcosS9ORF2810P (100% identity) | GGTCTC | M2.EcoC0786ORF3320P |
| 3330 | R | EcosS9ORF2810P (100% identity) | GGTCTC | EcoC0786ORF3320P |
| 3335 | McrC family protein | |||
| 9485 | TrmB family transcriptional regulator | |||
| 9490 | M | M.Ecos131ORF2315P (100% identity) | A | M.EcoC0786ORF9490P |
| 9505 | DUF3927 family protein | |||
| 13700 | drug/metabolite exporter YedA | |||
| 13705 | V | V.SflC32DcmP (74% identity) | CCWGG | V.EcoC0786DcmP |
| 13710 | M | M.SflC32DcmP (100% identity) | CCWGG | M.EcoC0786DcmP |
| 13715 | phosphohydrolase | |||
| 21700 | DNA-binding transcriptional regulator Fis | |||
| 21705 | M | M.PmeBin470ORFAP (100% identity) | ATGCAT | M.EcoC0786ORF21705P |
| 21710 | DUF2556 family protein | |||
| 22300 | ribulose-phosphate 3-epimerase | |||
| 22305 | M | M.SspPIBDamP (100% identity) | GATC | M.EcoC0786DamP |
| 22310 | cell division protein DamX | |||
| plasmid pC16EC0786-1 | ||||
| 25000 | 73 aa hypothetical protein | |||
| 25005 | M | M.Sfl0030ORFCP (100% identity) | SAY | M.EcoC0786ORF25005P |
| 25010 | 103 aa hypothetical protein | |||
| Type IV | ||||
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| 3330 | Alw26I/Eco31I/Esp3I family type II restriction | |||
| 3335 | R | EcosS9McrCP (100% identity) | EcoC0786McrCP | |
| 3340 | R | EcosS3McrBP (100% identity) | EcoC0786McrBP | |
| 3345 | glycosyltransferase | |||