Escherichia coli C16EC0768 |
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Putative Escherichia coli C16EC0768 RM systems
Ref: Yoon,E.-J. et al. unpublished
REBASE ref # 33366
| Sequence length: | GenBank #: | |
| Chromosome: | 5,197,232 bp | CP088643 |
| plasmid pC16EC0768-1: | 113,629 bp | CP088644 |
REBASE acronym: EcoC0768
Org_num: 53656
All begin LQR23_
| Type I | ||||
|---|---|---|---|---|
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| 19535 | type IV toxin-antitoxin system AbiEi family | |||
| 19540 | R | EcosS9ORF4930P (100% identity) | AAAGNNNNGTT | EcoC0768ORF19545P |
| 19545 | M | M.EcosS9ORF4930P (100% identity) | AAAGNNNNGTT | M.EcoC0768ORF19545P |
| 19550 | S | S.EcosS9ORF4930P (100% identity) | AAAGNNNNGTT | S.EcoC0768ORF19545P |
| 19555 | ash family protein | |||
| 21620 | restriction endonuclease | |||
| 21625 | M | M.Ecou021ORF19870P (100% identity) | RTACNNNNGTG | M.EcoC0768ORF21625P |
| 21630 | S | S.Ecou021ORF19870P (100% identity) | RTACNNNNGTG | S.EcoC0768ORF21625P |
| 21635 | R | Ecou021ORF19870P (100% identity) | RTACNNNNGTG | EcoC0768ORF21625P |
| 21640 | endoribonuclease SymE | |||
| plasmid pC16EC0768-1 | ||||
| 25810 | IS1-like element IS1A family transposase | |||
| 25815 | M | M.EcoEC0899ORF26310P (100% identity) | M.EcoC0768ORF25815P | |
| 25820 | type II toxin-antitoxin system Phd/YefM family | |||
| Type II | ||||
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| 2750 | DUF2556 family protein | |||
| 2755 | M | M.PmeBin470ORFAP (100% identity) | ATGCAT | M.EcoC0768ORF2755P |
| 2760 | DNA-binding transcriptional regulator Fis | |||
| 7110 | DUF1382 family protein | |||
| 7115 | M | M.Esp911AORF3194P (100% identity) | GATC | M.EcoC0768ORF7115P |
| 7120 | PerC family transcriptional regulator | |||
| 10225 | phosphohydrolase | |||
| 10230 | M | M.EcosS9DcmP (100% identity) | CCWGG | M.EcoC0768DcmP |
| 10235 | V | V.SflC32DcmP (74% identity) | CCWGG | V.EcoC0768DcmP |
| 10240 | drug/metabolite exporter YedA | |||
| 13765 | DUF3927 family protein | |||
| 13780 | M | M.EcosS9ORF10680P (100% identity) | A | M.EcoC0768ORF13780P |
| 13785 | TrmB family transcriptional regulator | |||
| 16045 | helix-turn-helix domain-containing protein | |||
| 16050 | M | M.KpnYN1ORFGP (89% identity) | M.EcoC0768ORF16050P | |
| 16055 | 71 aa hypothetical protein | |||
| 19715 | phage lysis protein EssD | |||
| 19720 | M | M.Sso63633ORF22290P (100% identity) | M.EcoC0768ORF19720P | |
| 19725 | 95 aa hypothetical protein | |||
| 19760 | LexA family transcriptional regulator | |||
| 19765 | M | M.EcoEC0899ORF22010P (100% identity) | GATC | M.EcoC0768ORF19765P |
| 19770 | PerC family transcriptional regulator | |||
| 22925 | response regulator receiver domain | |||
| 22930 | R | EcosS3ORF15775P (100% identity) | EcoC0768ORF22935P | |
| 22935 | M | M.EcosS3ORF15775P (100% identity) | M.EcoC0768ORF22935P | |
| 22940 | conjugal transfer protein TraG N-terminal | |||
| plasmid pC16EC0768-1 | ||||
| 25745 | 73 aa hypothetical protein | |||
| 25750 | M | M.UbapRSB107ORFAP (100% identity) | SAY | M.EcoC0768ORF25750P |
| 25755 | 103 aa hypothetical protein | |||