Escherichia coli E16EC0240 |
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Putative Escherichia coli E16EC0240 RM systems
Ref: Yoon,E.-J. et al. unpublished
REBASE ref # 33366
| Sequence length: | GenBank #: | |
| Chromosome: | 5,200,030 bp | CP088576 |
| plasmid pE16EC0240-1: | 58,674 bp | CP088574 |
| plasmid pE16EC0240-2: | 123,325 bp | CP088575 |
REBASE acronym: EcoC0240
Org_num: 53713
All begin LQT01_
| Type I | ||||
|---|---|---|---|---|
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| 13850 | endoribonuclease SymE | |||
| 13855 | S | S.EcosS1ORF16790P (100% identity) | CCANNNNNNNCTTC | S.EcoC0240ORF13860P |
| 13860 | M | M.EcosS1ORF16790P (100% identity) | CCANNNNNNNCTTC | M.EcoC0240ORF13860P |
| 13865 | R | EcosS1ORF16790P (100% identity) | CCANNNNNNNCTTC | EcoC0240ORF13860P |
| 13870 | adenine/cytosine-specific restriction | |||
| plasmid pE16EC0240-2 | ||||
| 805 | type II toxin-antitoxin system Phd/YefM family | |||
| 810 | M | M.SenceORFJP (99% identity) | M.EcoC0240ORF810P | |
| 815 | S | S.Sen68032ORF19880P (59% identity) | S.EcoC0240ORF810P | |
| 820 | IS1-like element IS1A family transposase | |||
| Type II | ||||
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| 7885 | DNA-binding transcriptional regulator Fis | |||
| 7890 | M | M.EcosS1ORF18905P (100% identity) | ATGCAT | M.EcoC0240ORF7890P |
| 7895 | DUF2556 family protein | |||
| 8415 | ribulose-phosphate 3-epimerase | |||
| 8420 | M | M.SspPIBDamP (100% identity) | GATC | M.EcoC0240DamP |
| 8425 | cell division protein DamX | |||
| 25020 | drug/metabolite exporter YedA | |||
| 25025 | V | V.SflSTLE3DcmP (100% identity) | CCWGG | V.EcoC0240DcmP |
| 25030 | M | M.SflSTLE3DcmP (100% identity) | CCWGG | M.EcoC0240DcmP |
| 25035 | HD domain-containing protein | |||
| 25710 | 145 aa hypothetical protein | |||
| 25715 | M | M.Sen21974ORF23385P (100% identity) | M.EcoC0240ORF25715P | |
| 25720 | 71 aa hypothetical protein | |||
| 26225 | phage portal protein | |||
| 1180 | R | EcosEC21ORF7960P (100% identity) | EcoC0240ORF1190P | |
| 1185 | 330 aa hypothetical protein | |||
| 1190 | M | M.Sbo812ORFEP (100% identity) | M.EcoC0240ORF1190P | |
| 1195 | replication endonuclease | |||
| plasmid pE16EC0240-1 | ||||
| 85 | 97 aa hypothetical protein | |||
| 90 | M | M.Xca80ORFEP (100% identity) | M.EcoC0240ORF90P | |
| 95 | 73 aa hypothetical protein | |||
| plasmid pE16EC0240-2 | ||||
| 870 | 103 aa hypothetical protein | |||
| 875 | M | M.UbapRSB107ORFAP (100% identity) | SAY | M.EcoC0240ORF875P |
| 880 | 73 aa hypothetical protein | |||
| Type IV | ||||
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| 13865 | type I restriction-modification system | |||
| 13870 | R | EcosS1MrrP (100% identity) | EcoC0240MrrP | |
| 13875 | GTPase | |||