Escherichia coli E16EC0256 |
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Putative Escherichia coli E16EC0256 RM systems
Ref: Yoon,E.-J. et al. unpublished
REBASE ref # 33366
| Sequence length: | GenBank #: | |
| Chromosome: | 4,985,128 bp | CP088570 |
| plasmid pE16EC0256-2: | 72,146 bp | CP088571 |
| plasmid pE16EC0256-3: | 144,632 bp | CP088572 |
| plasmid pE16EC0256-4: | 93,677 bp | CP088573 |
REBASE acronym: EcoC0256
Org_num: 53714
All begin LQT24_
| Type I | ||||
|---|---|---|---|---|
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| 17125 | endoribonuclease SymE | |||
| 17130 | R | Ecou021ORF19870P (100% identity) | RTACNNNNGTG | EcoC0256ORF17140P |
| 17135 | S | S.Ecou021ORF19870P (100% identity) | RTACNNNNGTG | S.EcoC0256ORF17140P |
| 17140 | M | M.Ecou021ORF19870P (100% identity) | RTACNNNNGTG | M.EcoC0256ORF17140P |
| 17145 | restriction endonuclease | |||
| 18945 | ash family protein | |||
| 18950 | S | S.EcosS9ORF4930P (100% identity) | AAAGNNNNGTT | S.EcoC0256ORF18955P |
| 18955 | M | M.EcosS9ORF4930P (100% identity) | AAAGNNNNGTT | M.EcoC0256ORF18955P |
| 18960 | R | EcosS9ORF4930P (100% identity) | AAAGNNNNGTT | EcoC0256ORF18955P |
| 18965 | type IV toxin-antitoxin system AbiEi family | |||
| Type II | ||||
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| 11220 | DNA-binding transcriptional regulator Fis | |||
| 11225 | M | M.PmeBin470ORFAP (100% identity) | ATGCAT | M.EcoC0256ORF11225P |
| 11230 | DUF2556 family protein | |||
| 11830 | ribulose-phosphate 3-epimerase | |||
| 11835 | M | M.SspPIBDamP (100% identity) | GATC | M.EcoC0256DamP |
| 11840 | cell division protein DamX | |||
| 16905 | helix-turn-helix domain-containing protein | |||
| 16910 | M | M1.EcosS9ORF2810P (100% identity) | GGTCTC | M1.EcoC0256ORF16910P |
| 16915 | M | M2.EcosS9ORF2810P (100% identity) | GGTCTC | M2.EcoC0256ORF16910P |
| 16920 | R | EcosS9ORF2810P (100% identity) | GGTCTC | EcoC0256ORF16910P |
| 16925 | IS3-like element ISEc52 family transposase | |||
| 22195 | 71 aa hypothetical protein | |||
| 22200 | M | M.KpnYN1ORFGP (89% identity) | M.EcoC0256ORF22200P | |
| 22205 | helix-turn-helix domain-containing protein | |||
| 24495 | TrmB family transcriptional regulator | |||
| 24500 | M | M.EcosS9ORF10680P (100% identity) | A | M.EcoC0256ORF24500P |
| 24515 | DUF3927 family protein | |||
| plasmid pE16EC0256-2 | ||||
| 25040 | 103 aa hypothetical protein | |||
| 25045 | M | M.UbapRSB107ORFAP (100% identity) | SAY | M.EcoC0256ORF25045P |
| 25050 | 73 aa hypothetical protein | |||
| plasmid pE16EC0256-3 | ||||
| 25440 | 73 aa hypothetical protein | |||
| 25445 | M | M.UbapRSB107ORFAP (100% identity) | SAY | M.EcoC0256ORF25445P |
| 25450 | 103 aa hypothetical protein | |||
| plasmid pE16EC0256-4 | ||||
| 26210 | 216 aa hypothetical protein | |||
| ??? | M | M.Sen4474ORF24135P (100% identity) | M.EcoC0256ORF26215P | |
| 26220 | glutamine--tRNA ligase | |||