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Putative Escherichia coli E16EC0678 RM systems
Ref: Yoon,E.-J. et al. unpublished
REBASE ref # 33366
Sequence length: | GenBank #: | |
Chromosome: | 5,239,633 bp | CP088526 |
plasmid pE16EC0678-1: | 107,329 bp | CP088527 |
REBASE acronym: EcoC0678
Org_num: 53726
All begin LQT67_
Type I | ||||
---|---|---|---|---|
ORF | Gene | Most similar | Specificity | Name |
Chromosome | ||||
2395 | endoribonuclease SymE | |||
2400 | R | Ecou021ORF19870P (100% identity) | RTACNNNNGTG | EcoC0678ORF2410P |
2405 | S | S.Ecou021ORF19870P (100% identity) | RTACNNNNGTG | S.EcoC0678ORF2410P |
2410 | M | M.Ecou021ORF19870P (100% identity) | RTACNNNNGTG | M.EcoC0678ORF2410P |
2415 | restriction endonuclease | |||
4480 | ash family protein | |||
4485 | S | S.EcosS9ORF4930P (100% identity) | AAAGNNNNGTT | S.EcoC0678ORF4490P |
4490 | M | M.EcosS9ORF4930P (100% identity) | AAAGNNNNGTT | M.EcoC0678ORF4490P |
4495 | R | EcosS9ORF4930P (100% identity) | AAAGNNNNGTT | EcoC0678ORF4490P |
4500 | type IV toxin-antitoxin system AbiEi family | |||
plasmid pE16EC0678-1 | ||||
26270 | type II toxin-antitoxin system Phd/YefM family | |||
26275 | M | M.EcoEC0899ORF26310P (100% identity) | M.EcoC0678ORF26275P | |
26280 | IS1-like element IS1A family transposase | |||
Type II | ||||
ORF | Gene | Most similar | Specificity | Name |
Chromosome | ||||
4265 | PerC family transcriptional regulator | |||
4270 | M | M.EcoEC0899ORF22010P (100% identity) | GATC | M.EcoC0678ORF4270P |
4275 | LexA family transcriptional regulator | |||
4310 | 95 aa hypothetical protein | |||
4315 | M | M.Sso63633ORF22290P (100% identity) | M.EcoC0678ORF4315P | |
4320 | phage lysis protein EssD | |||
7955 | 71 aa hypothetical protein | |||
7960 | M | M.KpnYN1ORFGP (89% identity) | M.EcoC0678ORF7960P | |
7965 | helix-turn-helix domain-containing protein | |||
10240 | TrmB family transcriptional regulator | |||
10245 | M | M.EcosS9ORF10680P (100% identity) | A | M.EcoC0678ORF10245P |
10260 | DUF3927 family protein | |||
13790 | drug/metabolite exporter YedA | |||
13795 | V | V.SflC32DcmP (74% identity) | CCWGG | V.EcoC0678DcmP |
13800 | M | M.EcosS9DcmP (100% identity) | CCWGG | M.EcoC0678DcmP |
13805 | phosphohydrolase | |||
16940 | PerC family transcriptional regulator | |||
16945 | M | M.Esp911AORF3194P (100% identity) | GATC | M.EcoC0678ORF16945P |
16950 | DUF1382 family protein | |||
21560 | DNA-binding transcriptional regulator Fis | |||
21565 | M | M.PmeBin470ORFAP (100% identity) | ATGCAT | M.EcoC0678ORF21565P |
21570 | DUF2556 family protein | |||
22170 | ribulose-phosphate 3-epimerase | |||
22175 | M | M.SspPIBDamP (100% identity) | GATC | M.EcoC0678DamP |
22180 | cell division protein DamX | |||
23695 | BREX system P-loop protein BrxC | |||
23700 | RM | EcosR9ORF15335P (100% identity) | CANCATC | EcoC0678ORF23700P |
23705 | BREX-1 system phosphatase PglZ type A | |||
plasmid pE16EC0678-1 | ||||
26335 | 103 aa hypothetical protein | |||
26340 | M | M.UbapRSB107ORFAP (100% identity) | SAY | M.EcoC0678ORF26340P |
26345 | 73 aa hypothetical protein |