Escherichia coli E16EC0601 |
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Putative Escherichia coli E16EC0601 RM systems
Ref: Yoon,E.-J. et al. unpublished
REBASE ref # 33366
| Sequence length: | GenBank #: | |
| Chromosome: | 5,096,006 bp | CP088529 |
| plasmid pE16EC0601-1: | 116,228 bp | CP088530 |
| plasmid pE16EC0601-2: | 70,293 bp | CP088531 |
REBASE acronym: EcoC0601
Org_num: 53725
All begin LQT69_
| Type I | ||||
|---|---|---|---|---|
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| 3695 | endoribonuclease SymE | |||
| 3700 | S | S.Ecos69ORF1130P (100% identity) | AACNNNNNNGTGC | S.EcoC0601ORF3705P |
| 3705 | M | M.Ecos69ORF1130P (100% identity) | AACNNNNNNGTGC | M.EcoC0601ORF3705P |
| 3710 | R | Ecoo241ORF21620P (100% identity) | AACNNNNNNGTGC | EcoC0601ORF3705P |
| 3715 | adenine/cytosine-specific restriction | |||
| Type II | ||||
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| 8485 | PerC family transcriptional regulator | |||
| 8490 | M | M.SflLIN17ORF17440P (100% identity) | GATC | M.EcoC0601ORF8490P |
| 8495 | LexA family transcriptional regulator | |||
| 10950 | recombination protein NinB | |||
| 10955 | M | M.SflWW1ORF7070P (100% identity) | GATC | M.EcoC0601ORF10955P |
| 10960 | NinE family protein | |||
| 15255 | drug/metabolite exporter YedA | |||
| 15260 | V | V.SflFF64DcmP (100% identity) | CCWGG | V.EcoC0601DcmP |
| 15265 | M | M.EcosEC29DcmP (100% identity) | CCWGG | M.EcoC0601DcmP |
| 15270 | phosphohydrolase | |||
| 18730 | PerC family transcriptional regulator | |||
| 18735 | M | M.EfeC18ORF5895P (100% identity) | M.EcoC0601ORF18735P | |
| 18740 | DUF1382 family protein | |||
| 22725 | DNA-binding transcriptional regulator Fis | |||
| 22730 | M | M.Ecos69ORF20890P (100% identity) | ATGCAT | M.EcoC0601ORF22730P |
| 22735 | DUF2556 family protein | |||
| 23255 | ribulose-phosphate 3-epimerase | |||
| 23260 | M | M.Ecos69DamP (100% identity) | GATC | M.EcoC0601DamP |
| 23265 | cell division protein DamX | |||
| plasmid pE16EC0601-1 | ||||
| 24935 | 103 aa hypothetical protein | |||
| 24940 | M | M.Ecowhn14ORF35P (100% identity) | M.EcoC0601ORF24940P | |
| 24945 | 73 aa hypothetical protein | |||
| plasmid pE16EC0601-2 | ||||
| 25770 | 97 aa hypothetical protein | |||
| 25775 | M | M.Ssop356ORFAP (100% identity) | M.EcoC0601ORF25775P | |
| 25780 | 73 aa hypothetical protein | |||
| Type IV | ||||
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| 3710 | type I restriction-modification system | |||
| 3715 | R | Ssp28760MrrP (100% identity) | EcoC0601MrrP | |
| 3720 | GTPase | |||