Escherichia coli E17EC0076 |
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Putative Escherichia coli E17EC0076 RM systems
Ref: Yoon,E.-J. et al. unpublished
REBASE ref # 33366
| Sequence length: | GenBank #: | |
| Chromosome: | 5,221,476 bp | CP088490 |
| plasmid pE17EC0076-1: | 91,489 bp | CP088491 |
| plasmid pE17EC0076-2: | 86,685 bp | CP088492 |
REBASE acronym: EcoC0076
Org_num: 53739
All begin LQQ55_
| Type I | ||||
|---|---|---|---|---|
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| 5095 | endoribonuclease SymE | |||
| 5100 | R | Ecou021ORF19870P (100% identity) | RTACNNNNGTG | EcoC0076ORF5110P |
| 5105 | S | S.Ecou021ORF19870P (100% identity) | RTACNNNNGTG | S.EcoC0076ORF5110P |
| 5110 | M | M.Ecou021ORF19870P (100% identity) | RTACNNNNGTG | M.EcoC0076ORF5110P |
| 5115 | restriction endonuclease | |||
| 7200 | ash family protein | |||
| 7205 | S | S.Ecos131ORF6575P (74% identity) | S2.EcoC0076ORF7215P | |
| 7210 | IS1 family transposase | |||
| ??? | S | S.Ecop4AORF19495P (23% identity) | S1.EcoC0076ORF7215P | |
| 7215 | M | M.EcosS9ORF4930P (100% identity) | M.EcoC0076ORF7215P | |
| 7220 | R | EcosS9ORF4930P (100% identity) | EcoC0076ORF7215P | |
| 7225 | type IV toxin-antitoxin system AbiEi family | |||
| Type II | ||||
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| 4740 | helix-turn-helix domain-containing protein | |||
| 4745 | M | M1.EcosS9ORF2810P (100% identity) | GGTCTC | M1.EcoC0076ORF4745P |
| 4750 | M | M2.EcosS9ORF2810P (100% identity) | GGTCTC | M2.EcoC0076ORF4745P |
| 4755 | R | EcosS9ORF2810P (100% identity) | GGTCTC | EcoC0076ORF4745P |
| 4760 | McrC family protein | |||
| 6985 | PerC family transcriptional regulator | |||
| 6990 | M | M.EcoEC0899ORF22010P (100% identity) | GATC | M.EcoC0076ORF6990P |
| 6995 | LexA family transcriptional regulator | |||
| 7030 | 95 aa hypothetical protein | |||
| 7035 | M | M.Sso63633ORF22290P (100% identity) | M.EcoC0076ORF7035P | |
| 7040 | phage lysis protein EssD | |||
| 10715 | 71 aa hypothetical protein | |||
| 10720 | M | M.KpnYN1ORFGP (89% identity) | M.EcoC0076ORF10720P | |
| 10725 | helix-turn-helix domain-containing protein | |||
| 12980 | TrmB family transcriptional regulator | |||
| 12985 | M | M.EcosS9ORF10680P (100% identity) | A | M.EcoC0076ORF12985P |
| 13000 | DUF3927 family protein | |||
| 16475 | drug/metabolite exporter YedA | |||
| 16480 | V | V.SflC32DcmP (74% identity) | CCWGG | V.EcoC0076DcmP |
| 16485 | M | M.EcosS9DcmP (100% identity) | CCWGG | M.EcoC0076DcmP |
| 16490 | phosphohydrolase | |||
| 19775 | PerC family transcriptional regulator | |||
| 19780 | M | M.Esp911AORF3194P (100% identity) | GATC | M.EcoC0076ORF19780P |
| 19785 | DUF1382 family protein | |||
| 24140 | DNA-binding transcriptional regulator Fis | |||
| 24145 | M | M.PmeBin470ORFAP (100% identity) | ATGCAT | M.EcoC0076ORF24145P |
| 24150 | DUF2556 family protein | |||
| plasmid pE17EC0076-1 | ||||
| 26110 | 103 aa hypothetical protein | |||
| 26115 | M | M.UbapRSB107ORFAP (100% identity) | SAY | M.EcoC0076ORF26115P |
| 26120 | 73 aa hypothetical protein | |||
| plasmid pE17EC0076-2 | ||||
| 26650 | 103 aa hypothetical protein | |||
| 26655 | M | M.SflC32ORFDP (100% identity) | SAY | M.EcoC0076ORF26655P |
| 26660 | 73 aa hypothetical protein | |||
| Type IV | ||||
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| 4755 | Alw26I/Eco31I/Esp3I family type II restriction | |||
| 4760 | R | EcosS9McrCP (100% identity) | EcoC0076McrCP | |
| 4765 | R | EcosS3McrBP (100% identity) | EcoC0076McrBP | |
| 4770 | glycosyltransferase | |||