Escherichia coli E17EC0036 |
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Putative Escherichia coli E17EC0036 RM systems
Ref: Yoon,E.-J. et al. unpublished
REBASE ref # 33366
| Sequence length: | GenBank #: | |
| Chromosome: | 5,037,702 bp | CP088494 |
| plasmid pE17EC0036-1: | 59,598 bp | CP088495 |
REBASE acronym: EcoC0036
Org_num: 53738
All begin LQT04_
| Type I | ||||
|---|---|---|---|---|
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| 12890 | type IV toxin-antitoxin system AbiEi family | |||
| 12895 | R | EcosS9ORF4930P (100% identity) | AAAGNNNNGTT | EcoC0036ORF12900P |
| 12900 | M | M.EcosS9ORF4930P (100% identity) | AAAGNNNNGTT | M.EcoC0036ORF12900P |
| 12905 | S | S.EcosS9ORF4930P (100% identity) | AAAGNNNNGTT | S.EcoC0036ORF12900P |
| 12910 | ash family protein | |||
| 14980 | restriction endonuclease | |||
| 14985 | M | M.Ecou021ORF19870P (100% identity) | RTACNNNNGTG | M.EcoC0036ORF14985P |
| 14990 | S | S.Ecou021ORF19870P (100% identity) | RTACNNNNGTG | S.EcoC0036ORF14985P |
| 14995 | R | Ecou021ORF19870P (100% identity) | RTACNNNNGTG | EcoC0036ORF14985P |
| 15000 | endoribonuclease SymE | |||
| plasmid pE17EC0036-1 | ||||
| 24890 | type II toxin-antitoxin system Phd/YefM family | |||
| 24895 | M | M.EcoEC0899ORF26310P (100% identity) | M.EcoC0036ORF24895P | |
| 24900 | IS1-like element IS1A family transposase | |||
| Type II | ||||
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| 3545 | phosphohydrolase | |||
| 3550 | M | M.EcosS9DcmP (100% identity) | CCWGG | M.EcoC0036DcmP |
| 3555 | V | V.SflC32DcmP (74% identity) | CCWGG | V.EcoC0036DcmP |
| 3560 | drug/metabolite exporter YedA | |||
| 7105 | DUF3927 family protein | |||
| 7120 | M | M.EcosS9ORF10680P (100% identity) | A | M.EcoC0036ORF7120P |
| 7125 | TrmB family transcriptional regulator | |||
| 9390 | helix-turn-helix domain-containing protein | |||
| 9395 | M | M.KpnYN1ORFGP (89% identity) | M.EcoC0036ORF9395P | |
| 9400 | 71 aa hypothetical protein | |||
| 13070 | phage lysis protein EssD | |||
| 13075 | M | M.Sso63633ORF22290P (100% identity) | M.EcoC0036ORF13075P | |
| 13080 | 95 aa hypothetical protein | |||
| 13115 | LexA family transcriptional regulator | |||
| 13120 | M | M.EcoEC0899ORF22010P (100% identity) | GATC | M.EcoC0036ORF13120P |
| 13125 | PerC family transcriptional regulator | |||
| 16170 | response regulator receiver domain | |||
| 16175 | R | EcosS3ORF15775P (100% identity) | EcoC0036ORF16180P | |
| 16180 | M | M.EcosS3ORF15775P (100% identity) | M.EcoC0036ORF16180P | |
| 16185 | conjugal transfer protein TraG N-terminal | |||
| 20495 | cell division protein DamX | |||
| 20500 | M | M.SspPIBDamP (100% identity) | GATC | M.EcoC0036DamP |
| 20505 | ribulose-phosphate 3-epimerase | |||
| 21095 | DUF2556 family protein | |||
| 21100 | M | M.PmeBin470ORFAP (100% identity) | ATGCAT | M.EcoC0036ORF21100P |
| 21105 | DNA-binding transcriptional regulator Fis | |||
| plasmid pE17EC0036-1 | ||||
| 24955 | 103 aa hypothetical protein | |||
| 24960 | M | M.UbapRSB107ORFAP (100% identity) | SAY | M.EcoC0036ORF24960P |
| 24965 | 73 aa hypothetical protein | |||