Escherichia coli F16EC0024 |
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Putative Escherichia coli F16EC0024 RM systems
Ref: Yoon,E.-J. et al. unpublished
REBASE ref # 33366
| Sequence length: | GenBank #: | |
| Chromosome: | 5,170,429 bp | CP088456 |
| plasmid pF16EC0024-1: | 123,697 bp | CP088457 |
| plasmid pF16EC0024-2: | 88,078 bp | CP088458 |
REBASE acronym: EcoF16024
Org_num: 53770
All begin LQR18_
| Type I | ||||
|---|---|---|---|---|
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| 18985 | transcription factor | |||
| 18990 | M | M.EcoC1059ORF24910P (100% identity) | CCAYNNNNNGTNG | M.EcoF16024ORF18990P |
| 18995 | S | S.EcoEH031ORF313P (100% identity) | CCAYNNNNNGTNG | S.EcoF16024ORF18990P |
| 19000 | DUF4433 domain-containing protein | |||
| 19005 | macro domain-containing protein | |||
| 19010 | R | EcoEH031ORF313P (100% identity) | CCAYNNNNNGTNG | EcoF16024ORF18990P |
| 19015 | M48 family metallopeptidase | |||
| 20725 | restriction endonuclease | |||
| 20730 | M | M.EcoW072ORF20660P (100% identity) | GGYANNNNNGTNG | M.EcoF16024ORF20730P |
| 20735 | S | S.Ecost88ORF20845P (100% identity) | GGYANNNNNGTNG | S.EcoF16024ORF20730P |
| 20740 | R | Ecost88ORF20845P (100% identity) | GGYANNNNNGTNG | EcoF16024ORF20730P |
| 20745 | endoribonuclease SymE | |||
| Type II | ||||
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| 2555 | DUF2556 family protein | |||
| 2560 | M | M.Ecos19ORF2295P (100% identity) | ATGCAT | M.EcoF16024ORF2560P |
| 2565 | DNA-binding transcriptional regulator Fis | |||
| 10030 | phosphohydrolase | |||
| 10035 | M | M.SflC32DcmP (100% identity) | CCWGG | M.EcoF16024DcmP |
| 10040 | V | V.EcosC25DcmP (100% identity) | CCWGG | V.EcoF16024DcmP |
| 10045 | drug/metabolite exporter YedA | |||
| 16975 | 71 aa hypothetical protein | |||
| 16980 | M | M.Sen21974ORF23385P (100% identity) | M.EcoF16024ORF16980P | |
| 16985 | 145 aa hypothetical protein | |||
| 21275 | conjugal transfer protein TraG N-terminal | |||
| 21280 | M | M.EcosS3ORF15775P (100% identity) | M.EcoF16024ORF21280P | |
| 21285 | R | EcosS3ORF15775P (100% identity) | EcoF16024ORF21280P | |
| 21290 | response regulator receiver domain | |||
| plasmid pF16EC0024-1 | ||||
| 25225 | 73 aa hypothetical protein | |||
| 25230 | M | M.Ecos69ORF26765P (100% identity) | M.EcoF16024ORF25230P | |
| 25235 | 103 aa hypothetical protein | |||
| plasmid pF16EC0024-2 | ||||
| 25460 | 73 aa hypothetical protein | |||
| 25465 | M | M.SflC32ORFDP (100% identity) | SAY | M.EcoF16024ORF25465P |
| 25470 | 103 aa hypothetical protein | |||
| Orphan M | ||||
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| 13875 | NinE family protein | |||
| 13880 | M | M.EcosC25ORF16305P (100% identity) | GATC | M.EcoF16024ORF13880P |
| 13885 | recombination protein NinB | |||