Escherichia coli F17EC0079 |
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Putative Escherichia coli F17EC0079 RM systems
Ref: Yoon,E.-J. et al. unpublished
REBASE ref # 33366
| Sequence length: | GenBank #: | |
| Chromosome: | 5,202,860 bp | CP088363 |
| plasmid pF17EC0079-1: | 80,900 bp | CP088364 |
| plasmid pF17EC0079-2: | 16,590 bp | CP088365 |
REBASE acronym: EcoEC0079
Org_num: 53796
All begin LQR26_
| Type I | ||||
|---|---|---|---|---|
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| 3800 | endoribonuclease SymE | |||
| 3805 | R | Ecou021ORF19870P (100% identity) | RTACNNNNGTG | EcoEC0079ORF3815P |
| 3810 | S | S.Ecou021ORF19870P (100% identity) | RTACNNNNGTG | S.EcoEC0079ORF3815P |
| 3815 | M | M.Ecou021ORF19870P (100% identity) | RTACNNNNGTG | M.EcoEC0079ORF3815P |
| 3820 | restriction endonuclease | |||
| 5885 | ash family protein | |||
| 5890 | S | S.EcosS9ORF4930P (100% identity) | AAAGNNNNGTT | S.EcoEC0079ORF5895P |
| 5895 | M | M.EcosS9ORF4930P (100% identity) | AAAGNNNNGTT | M.EcoEC0079ORF5895P |
| 5900 | R | EcosS9ORF4930P (100% identity) | AAAGNNNNGTT | EcoEC0079ORF5895P |
| 5905 | type IV toxin-antitoxin system AbiEi family | |||
| plasmid pF17EC0079-2 | ||||
| 26100 | type II toxin-antitoxin system | |||
| 26105 | M | M.EcoEC0899ORF26310P (99% identity) | M.EcoEC0079ORF26105P | |
| 26110 | IS1 family transposase | |||
| Type II | ||||
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| 2505 | conjugal transfer protein TraG N-terminal | |||
| 2510 | M | M.EcosS3ORF15775P (100% identity) | M.EcoEC0079ORF2510P | |
| 2515 | R | EcosS3ORF15775P (100% identity) | EcoEC0079ORF2510P | |
| 2520 | response regulator receiver domain | |||
| 5670 | PerC family transcriptional regulator | |||
| 5675 | M | M.EcoEC0899ORF22010P (100% identity) | GATC | M.EcoEC0079ORF5675P |
| 5680 | LexA family transcriptional regulator | |||
| 5715 | 95 aa hypothetical protein | |||
| 5720 | M | M.Sso63633ORF22290P (100% identity) | M.EcoEC0079ORF5720P | |
| 5725 | phage lysis protein EssD | |||
| 9385 | 71 aa hypothetical protein | |||
| 9390 | M | M.KpnYN1ORFGP (89% identity) | M.EcoEC0079ORF9390P | |
| 9395 | helix-turn-helix domain-containing protein | |||
| 11665 | TrmB family transcriptional regulator | |||
| 11670 | M | M.EcosS9ORF10680P (100% identity) | A | M.EcoEC0079ORF11670P |
| 11685 | DUF3927 family protein | |||
| 18315 | PerC family transcriptional regulator | |||
| 18320 | M | M.Esp911AORF3194P (100% identity) | GATC | M.EcoEC0079ORF18320P |
| 18325 | DUF1382 family protein | |||
| 22675 | DNA-binding transcriptional regulator Fis | |||
| 22680 | M | M.PmeBin470ORFAP (100% identity) | ATGCAT | M.EcoEC0079ORF22680P |
| 22685 | DUF2556 family protein | |||
| 23275 | ribulose-phosphate 3-epimerase | |||
| 23280 | M | M.SspPIBDamP (100% identity) | GATC | M.EcoEC0079DamP |
| 23285 | cell division protein DamX | |||
| 24800 | BREX system P-loop protein BrxC | |||
| 24805 | RM | EcosR9ORF15335P (100% identity) | CANCATC | EcoEC0079ORF24805P |
| 24810 | BREX-1 system phosphatase PglZ type A | |||
| plasmid pF17EC0079-1 | ||||
| 25515 | 103 aa hypothetical protein | |||
| 25520 | M | M.UbapRSB107ORFAP (100% identity) | SAY | M.EcoEC0079ORF25520P |
| 25525 | 73 aa hypothetical protein | |||