Escherichia coli 437022 |
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Putative Escherichia coli 437022 RM systems
Ref: Greig,D.R. et al. unpublished
REBASE ref # 33271
Complete sequence: 5,554,737 bp
GenBank #: CP088036
REBASE acronym: Eco437022
Org_num: 53285
All begin E9K33_
| Type I | ||||
|---|---|---|---|---|
| ORF | Gene | Most similar | Specificity | Name |
| 3395 | endoribonuclease SymE | |||
| 3400 | S | S.EcosPA8ORF17615P (100% identity) | CACNNNNNNNCTGG | S.Eco437022ORF3405P |
| 3405 | M | M.EcosPA8ORF17615P (100% identity) | CACNNNNNNNCTGG | M.Eco437022ORF3405P |
| 3410 | R | Ecos1613ORF27060P (100% identity) | CACNNNNNNNCTGG | Eco437022ORF3405P |
| 3415 | DUF262 domain-containing HNH endonuclease family | |||
| Type II | ||||
| ORF | Gene | Most similar | Specificity | Name |
| 1885 | 65 aa hypothetical protein | |||
| 1890 | M | M.EcosPA8ORF16100P (100% identity) | M.Eco437022ORF1890P | |
| 1895 | Eae protein | |||
| 3120 | transposase | |||
| 3125 | R | Ecos1613ORF26795P (100% identity) | Eco437022ORF3125P | |
| 3130 | N-acetylneuraminic acid mutarotase | |||
| 3160 | DEAD/DEAH box helicase | |||
| 3165 | RM | EcosPA8ORF17390P (100% identity) | GAAABCC | Eco437022ORF3165P |
| 11490 | epoxyqueuosine reductase QueH | |||
| 11495 | M | M.EcoZ910ORF13770P (100% identity) | GCCGGC | M1.Eco437022ORF11495P |
| 11500 | R | EcoZ910ORF13770P (100% identity) | GCCGGC | Eco437022ORF11495P |
| 11505 | 90 aa hypothetical protein | |||
| 11510 | DUF968 domain-containing protein | |||
| 11515 | RusA family crossover junction | |||
| 11520 | antitermination protein | |||
| 11525 | TrmB family transcriptional regulator | |||
| 11530 | M | M.EcoZ910ORF13805P (100% identity) | M2.Eco437022ORF11495P | |
| 11535 | DUF1737 domain-containing protein | |||
| 13220 | DUF1737 domain-containing protein | |||
| 13235 | M | M.EcosPA8ORF27255P (100% identity) | M.Eco437022ORF13235P | |
| 13240 | TrmB family transcriptional regulator | |||
| 15755 | drug/metabolite exporter YedA | |||
| 15760 | V | V.EcosPA8DcmP (100% identity) | CCWGG | V.Eco437022DcmP |
| 15765 | M | M.SflLIN6DcmP (100% identity) | CCWGG | M.Eco437022DcmP |
| 15770 | phosphohydrolase | |||
| 17855 | NinE family protein | |||
| 17860 | M | M.Eph2851ORFAP (100% identity) | GATC | M.Eco437022ORF17860P |
| 17865 | recombination protein NinB | |||
| 20290 | NinE family protein | |||
| 20295 | M | M.SflWW1ORF7070P (100% identity) | GATC | M.Eco437022ORF20295P |
| 20300 | recombination protein NinB | |||
| 25205 | DNA-binding transcriptional regulator Fis | |||
| 25210 | M | M.EcosPA8ORF11510P (100% identity) | ATGCAT | M.Eco437022ORF25210P |
| 25215 | DUF2556 family protein | |||
| 25720 | ribulose-phosphate 3-epimerase | |||
| 25725 | M | M.UbaC1152DamP (100% identity) | GATC | M.Eco437022DamP |
| 25730 | cell division protein DamX | |||
| Type IV | ||||
| ORF | Gene | Most similar | Specificity | Name |
| 3380 | DUF1127 domain-containing protein | |||
| 3385 | R | Ecos1613GmrSP (100% identity) | Eco437022GmrSP | |
| 3390 | R | EcosPA8GmrSDP (55% identity) | Eco437022GmrDP | |
| 3395 | endoribonuclease SymE | |||