Escherichia coli 432299 |
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Putative Escherichia coli 432299 RM systems
Ref: Greig,D.R. et al. unpublished
REBASE ref # 33271
| Sequence length: | GenBank #: | |
| Chromosome: | 5,507,151 bp | CP088044 |
| plasmid p432299: | 94,058 bp | CP088045 |
REBASE acronym: Eco432299
Org_num: 53279
All begin E8R41_
| Type I | ||||
|---|---|---|---|---|
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| 3410 | endoribonuclease SymE | |||
| 3415 | S | S.EcosPA8ORF17615P (100% identity) | CACNNNNNNNCTGG | S.Eco432299ORF3420P |
| 3420 | M | M.EcosPA8ORF17615P (100% identity) | CACNNNNNNNCTGG | M.Eco432299ORF3420P |
| 3425 | R | Ecos1613ORF27060P (100% identity) | CACNNNNNNNCTGG | Eco432299ORF3420P |
| 3430 | DUF262 domain-containing HNH endonuclease family | |||
| Type II | ||||
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| 1890 | 65 aa hypothetical protein | |||
| 1895 | M | M.EcosPA8ORF16100P (100% identity) | M.Eco432299ORF1895P | |
| 1900 | Eae protein | |||
| 3125 | transposase | |||
| 3130 | R | Ecos1613ORF26795P (100% identity) | Eco432299ORF3130P | |
| 3135 | N-acetylneuraminic acid mutarotase | |||
| 3165 | DEAD/DEAH box helicase | |||
| 3170 | RM | EcosPA8ORF17390P (100% identity) | GAAABCC | Eco432299ORF3170P |
| 12985 | DUF1737 domain-containing protein | |||
| 13000 | M | M.EcosPA8ORF27255P (100% identity) | M.Eco432299ORF13000P | |
| 13005 | TrmB family transcriptional regulator | |||
| 15515 | drug/metabolite exporter YedA | |||
| 15520 | V | V.EcosPA8DcmP (100% identity) | CCWGG | V.Eco432299DcmP |
| 15525 | M | M.SflLIN6DcmP (100% identity) | CCWGG | M.Eco432299DcmP |
| 15530 | phosphohydrolase | |||
| 20050 | NinE family protein | |||
| 20055 | M | M.SflWW1ORF7070P (100% identity) | GATC | M.Eco432299ORF20055P |
| 20060 | recombination protein NinB | |||
| 24955 | DNA-binding transcriptional regulator Fis | |||
| 24960 | M | M.EcosPA8ORF11510P (100% identity) | ATGCAT | M.Eco432299ORF24960P |
| 24965 | DUF2556 family protein | |||
| 25470 | ribulose-phosphate 3-epimerase | |||
| 25475 | M | M.UbaC1152DamP (100% identity) | GATC | M.Eco432299DamP |
| 25480 | cell division protein DamX | |||
| plasmid p432299 | ||||
| 27600 | 101 aa hypothetical protein | |||
| 27605 | M | M.EcosPA8ORF27775P (100% identity) | M.Eco432299ORF27605P | |
| 27610 | 73 aa hypothetical protein | |||
| Type IV | ||||
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| 3395 | DUF1127 domain-containing protein | |||
| 3400 | R | Ecos1613GmrSP (100% identity) | Eco432299GmrSP | |
| 3405 | R | EcosPA8GmrSDP (55% identity) | Eco432299GmrDP | |
| 3410 | endoribonuclease SymE | |||