Ref: Greig,D.R. et al. unpublished

REBASE ref # 33271

Complete sequence: 5,554,878 bp

GenBank #: CP088046

REBASE acronym: Eco432298

Org_num: 53278

 

All begin E8R50_

Type I
ORF Gene Most similar Specificity Name
 
3400 endoribonuclease SymE
3405 S S.EcosPA8ORF17615P (100% identity) CACNNNNNNNCTGG S.Eco432298ORF3410P
3410 M M.EcosPA8ORF17615P (100% identity) CACNNNNNNNCTGG M.Eco432298ORF3410P
3415 R Ecos1613ORF27060P (100% identity) CACNNNNNNNCTGG Eco432298ORF3410P
3420 DUF262 domain-containing HNH endonuclease family
Type II
ORF Gene Most similar Specificity Name
 
1890 65 aa hypothetical protein
1895 M M.EcosPA8ORF16100P (100% identity) M.Eco432298ORF1895P
1900 Eae protein
 
3125 transposase
3130 R Ecos1613ORF26795P (100% identity) Eco432298ORF3130P
3135 N-acetylneuraminic acid mutarotase
 
3165 DEAD/DEAH box helicase
3170 RM EcosPA8ORF17390P (100% identity) GAAABCC Eco432298ORF3170P
 
11515 epoxyqueuosine reductase QueH
11520 M M.EcoZ910ORF13770P (100% identity) GCCGGC M1.Eco432298ORF11520P
11525 R EcoZ910ORF13770P (100% identity) GCCGGC Eco432298ORF11520P
11530 90 aa hypothetical protein
11535 DUF968 domain-containing protein
11540 RusA family crossover junction
11545 antitermination protein
11550 TrmB family transcriptional regulator
11555 M M.EcoZ910ORF13805P (100% identity) M2.Eco432298ORF11520P
11560 DUF1737 domain-containing protein
 
13255 DUF1737 domain-containing protein
13270 M M.EcosPA8ORF27255P (100% identity) M.Eco432298ORF13270P
13275 TrmB family transcriptional regulator
 
15795 drug/metabolite exporter YedA
15800 V V.EcosPA8DcmP (100% identity) CCWGG V.Eco432298DcmP
15805 M M.SflLIN6DcmP (100% identity) CCWGG M.Eco432298DcmP
15810 phosphohydrolase
 
17885 NinE family protein
17890 M M.Eph2851ORFAP (100% identity) GATC M.Eco432298ORF17890P
17895 recombination protein NinB
 
20320 NinE family protein
20325 M M.SflWW1ORF7070P (100% identity) GATC M.Eco432298ORF20325P
20330 recombination protein NinB
 
25220 DNA-binding transcriptional regulator Fis
25225 M M.EcosPA8ORF11510P (100% identity) ATGCAT M.Eco432298ORF25225P
25230 DUF2556 family protein
 
25735 ribulose-phosphate 3-epimerase
25740 M M.UbaC1152DamP (100% identity) GATC M.Eco432298DamP
25745 cell division protein DamX
Type IV
ORF Gene Most similar Specificity Name
 
3385 DUF1127 domain-containing protein
3390 R Ecos1613GmrSP (100% identity) Eco432298GmrSP
3395 R EcosPA8GmrSDP (55% identity) Eco432298GmrDP
3400 endoribonuclease SymE
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