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Putative Escherichia coli 421196 RM systems
Ref: Greig,D.R. et al. unpublished
REBASE ref # 33271
Complete sequence: 5,555,066 bp
GenBank #: CP088058
REBASE acronym: Eco421196
Org_num: 53270
All begin E8R53_
Type I | ||||
---|---|---|---|---|
ORF | Gene | Most similar | Specificity | Name |
3400 | endoribonuclease SymE | |||
3405 | S | S.EcosPA8ORF17615P (100% identity) | CACNNNNNNNCTGG | S.Eco421196ORF3410P |
3410 | M | M.EcosPA8ORF17615P (100% identity) | CACNNNNNNNCTGG | M.Eco421196ORF3410P |
3415 | R | Ecos1613ORF27060P (100% identity) | CACNNNNNNNCTGG | Eco421196ORF3410P |
3420 | DUF262 domain-containing HNH endonuclease family | |||
Type II | ||||
ORF | Gene | Most similar | Specificity | Name |
1890 | 65 aa hypothetical protein | |||
1895 | M | M.EcosPA8ORF16100P (100% identity) | M.Eco421196ORF1895P | |
1900 | Eae protein | |||
3125 | transposase | |||
3130 | R | Ecos1613ORF26795P (100% identity) | Eco421196ORF3130P | |
3135 | N-acetylneuraminic acid mutarotase | |||
3165 | DEAD/DEAH box helicase | |||
3170 | RM | EcosPA8ORF17390P (100% identity) | GAAABCC | Eco421196ORF3170P |
11520 | epoxyqueuosine reductase QueH | |||
11525 | M | M.EcoZ910ORF13770P (100% identity) | GCCGGC | M1.Eco421196ORF11525P |
11530 | R | EcoZ910ORF13770P (100% identity) | GCCGGC | Eco421196ORF11525P |
11535 | 90 aa hypothetical protein | |||
11540 | DUF968 domain-containing protein | |||
11545 | RusA family crossover junction | |||
11550 | antitermination protein | |||
11555 | TrmB family transcriptional regulator | |||
11560 | M | M.EcoZ910ORF13805P (100% identity) | M2.Eco421196ORF11525P | |
11565 | DUF1737 domain-containing protein | |||
13250 | DUF1737 domain-containing protein | |||
13265 | M | M.EcosPA8ORF27255P (100% identity) | M.Eco421196ORF13265P | |
13270 | TrmB family transcriptional regulator | |||
15775 | drug/metabolite exporter YedA | |||
15780 | V | V.EcosPA8DcmP (100% identity) | CCWGG | V.Eco421196DcmP |
15785 | M | M.SflLIN6DcmP (100% identity) | CCWGG | M.Eco421196DcmP |
15790 | phosphohydrolase | |||
17875 | NinE family protein | |||
17880 | M | M.Eph2851ORFAP (100% identity) | GATC | M.Eco421196ORF17880P |
17885 | recombination protein NinB | |||
20320 | NinE family protein | |||
20325 | M | M.SflWW1ORF7070P (100% identity) | GATC | M.Eco421196ORF20325P |
20330 | recombination protein NinB | |||
25220 | DNA-binding transcriptional regulator Fis | |||
25225 | M | M.EcosPA8ORF11510P (100% identity) | ATGCAT | M.Eco421196ORF25225P |
25230 | DUF2556 family protein | |||
25735 | ribulose-phosphate 3-epimerase | |||
25740 | M | M.UbaC1152DamP (100% identity) | GATC | M.Eco421196DamP |
25745 | cell division protein DamX | |||
Type IV | ||||
ORF | Gene | Most similar | Specificity | Name |
3385 | DUF1127 domain-containing protein | |||
3390 | R | Ecos1613GmrSP (100% identity) | Eco421196GmrSP | |
3395 | R | EcosPA8GmrSDP (55% identity) | Eco421196GmrDP | |
3400 | endoribonuclease SymE |