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Putative Sulfitobacter pseudonitzschiae SC1-105 RM systems
Ref: Qu,L. et al. unpublished
REBASE ref # 32465
Sequence length: | GenBank #: | |
Chromosome: | 3,849,952 bp | CP087002 |
plasmid P4: | 157,667 bp | CP087006 |
REBASE acronym: SpsSC1105
Org_num: 55890
All begin LOE06_
Type I | ||||
---|---|---|---|---|
ORF | Gene | Most similar | Specificity | Name |
Chromosome | ||||
18990 | 229 aa hypothetical protein | |||
18995 | M | M.SpsTT3774ORF7730P (100% identity) | M.SpsSC1105ORF18995P | |
19000 | DUF262 domain-containing protein | |||
19005 | S | S.SpsTT3774ORF7730P (100% identity) | S.SpsSC1105ORF18995P | |
19010 | R | SpsTT3774ORF7730P (100% identity) | SpsSC1105ORF18995P | |
19020 | IS110 family transposase | |||
Type II | ||||
ORF | Gene | Most similar | Specificity | Name |
Chromosome | ||||
4770 | Lrp/AsnC ligand binding domain-containing | |||
4775 | R | SpsTT3774ORF12735P (100% identity) | SpsSC1105ORF4780P | |
4780 | M | M.SpsTT3774ORF12735P (100% identity) | M.SpsSC1105ORF4780P | |
4790 | VOC family protein | |||
9450 | DDE-type integrase/transposase/recombinase | |||
9455 | M | M.SpsTT3774DndCP (100% identity) | M.SpsSC1105DndCP | |
9460 | 207 aa hypothetical protein | |||
9560 | 114 aa hypothetical protein | |||
??? | M | M.SpsTT3774ORF17520P (100% identity) | M.SpsSC1105ORF9570P | |
9575 | helix-turn-helix domain-containing protein | |||
plasmid P4 | ||||
22480 | type II toxin-antitoxin system VapC family | |||
22485 | RM | SpsTT3774ORF21845P (100% identity) | SpsSC1105ORF22485P | |
22490 | HEPN domain-containing protein |