Escherichia coli elppa1 |
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Putative Escherichia coli elppa1 RM systems
Ref: Huang,Y.T. unpublished
REBASE ref # 31747
Complete sequence: 5,219,152 bp
GenBank #: CP083534
REBASE acronym: Ecoppa1
Org_num: 53948
All begin K9U04_
| Type II | ||||
|---|---|---|---|---|
| ORF | Gene | Most similar | Specificity | Name |
| 540 | ribulose-phosphate 3-epimerase | |||
| 545 | M | M.SspPIBDamP (100% identity) | GATC | M.Ecoppa1DamP |
| 550 | cell division protein DamX | |||
| 7895 | cell division protein ZapA | |||
| 7900 | M | M.Sbo812ORFAP (100% identity) | GATC | M.Ecoppa1ORF7900P |
| 7905 | DUF1317 domain-containing protein | |||
| 9605 | PerC family transcriptional regulator | |||
| 9610 | M | M.EcosEC8ORF20220P (100% identity) | GATC | M.Ecoppa1ORF9610P |
| 9615 | LexA family transcriptional regulator | |||
| 11245 | TraR/DksA family transcriptional regulator | |||
| 11250 | M | M.Eco468ORF16860P (100% identity) | GATC | M.Ecoppa1ORF11250P |
| 11255 | replication endonuclease | |||
| 11515 | helix-turn-helix domain-containing protein | |||
| 11520 | M | M.KaeCRE8ORF15605P (100% identity) | M.Ecoppa1ORF11520P | |
| 11525 | 71 aa hypothetical protein | |||
| 14100 | TrmB family transcriptional regulator | |||
| 14105 | M | M.SboBSORF1444P (100% identity) | A | M.Ecoppa1ORF14105P |
| 14125 | 39 aa hypothetical protein | |||
| 17675 | drug/metabolite exporter YedA | |||
| 17680 | V | V.SflC32DcmP (74% identity) | CCWGG | V.Ecoppa1DcmP |
| 17685 | M | M.EcosS9DcmP (100% identity) | CCWGG | M.Ecoppa1DcmP |
| 17690 | phosphohydrolase | |||
| 21230 | PerC family transcriptional regulator | |||
| 21235 | M | M.Esp911AORF3194P (100% identity) | GATC | M.Ecoppa1ORF21235P |
| 21240 | DUF1382 family protein | |||
| 22270 | LexA family transcriptional regulator | |||
| 22275 | M | M.EcoXMORF15795P (100% identity) | GATC | M.Ecoppa1ORF22275P |
| 22280 | PerC family transcriptional regulator | |||
| 26035 | DNA-binding transcriptional regulator Fis | |||
| 26040 | M | M.PmeBin470ORFAP (100% identity) | ATGCAT | M.Ecoppa1ORF26040P |
| 26045 | DUF2556 family protein | |||
| Type IV | ||||
| ORF | Gene | Most similar | Specificity | Name |
| 6190 | type I restriction-modification system | |||
| 6195 | R | EcosS1MrrP (100% identity) | Ecoppa1MrrP | |
| 6200 | GTPase | |||
| 22065 | DinI-like family protein | |||
| 22070 | R | EspFAAGmrSDP (100% identity) | Ecoppa1GmrSDP | |
| 22075 | recombinase family protein | |||
| Orphan M | ||||
| ORF | Gene | Most similar | Specificity | Name |
| 13215 | recombination protein NinB | |||
| 13220 | M | M.EcosC25ORF16305P (100% identity) | GATC | M.Ecoppa1ORF13220P |
| 13225 | NinE family protein | |||