Escherichia coli elppa8 |
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Putative Escherichia coli elppa8 RM systems
Ref: Huang,Y.T. unpublished
REBASE ref # 31747
| Sequence length: | GenBank #: | |
| Chromosome: | 4,877,488 bp | CP083492 |
| plasmid unnamed3: | 137,552 bp | CP083494 |
| plasmid unnamed4: | 63,040 bp | CP083495 |
| plasmid unnamed5: | 110,410 bp | CP083496 |
REBASE acronym: Ecoppa8
Org_num: 53955
All begin K9U11_
| Type I | ||||
|---|---|---|---|---|
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| 11925 | GTPase family protein | |||
| 11930 | M | M.Sso8ORF17680P (99% identity) | AAAYNNNNNNCTC | M.Ecoppa8ORF11930P |
| 11935 | S | S.Sso8ORF17680P (100% identity) | AAAYNNNNNNCTC | S.Ecoppa8ORF11930P |
| 11940 | R | Sso8ORF17680P (99% identity) | AAAYNNNNNNCTC | Ecoppa8ORF11930P |
| 11945 | IS5 family transposase | |||
| Type II | ||||
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| 13850 | HNH endonuclease | |||
| 13855 | R | Sso8ORF19860P (100% identity) | Ecoppa8ORF13855P | |
| 13860 | 55 aa hypothetical protein | |||
| 15440 | phage lysis protein EssD | |||
| 15445 | M | M.Sso63633ORF22290P (100% identity) | M.Ecoppa8ORF15445P | |
| 15450 | 67 aa hypothetical protein | |||
| 15480 | LexA family transcriptional regulator | |||
| 15485 | M | M.Sso30ORF925P (98% identity) | GATC | M.Ecoppa8ORF15485P |
| 15490 | PerC family transcriptional regulator | |||
| 15550 | 159 aa hypothetical protein | |||
| 15555 | M | M.EcoC0348ORF6975P (95% identity) | M.Ecoppa8ORF15555P | |
| 15560 | ead/Ea22-like family protein | |||
| 16430 | 330 aa hypothetical protein | |||
| 16435 | M | M.SflFF38ORF15P (99% identity) | M.Ecoppa8ORF16435P | |
| 16440 | replication endonuclease | |||
| 19275 | cell division protein DamX | |||
| 19280 | M | M.UbaC1152DamP (100% identity) | GATC | M.Ecoppa8DamP |
| 19285 | ribulose-phosphate 3-epimerase | |||
| 19920 | DUF2556 family protein | |||
| 19925 | M | M.Sso8ORF2545P (100% identity) | ATGCAT | M.Ecoppa8ORF19925P |
| 19930 | DNA-binding transcriptional regulator Fis | |||
| plasmid unnamed3 | ||||
| 24630 | 100 aa hypothetical protein | |||
| 24635 | M | M.YrupYR1ORFCP (99% identity) | M.Ecoppa8ORF24635P | |
| 24640 | 143 aa hypothetical protein | |||
| plasmid unnamed4 | ||||
| 25355 | 103 aa hypothetical protein | |||
| 25360 | M | M.SspPIBORF23080P (100% identity) | M.Ecoppa8ORF25360P | |
| 25365 | 73 aa hypothetical protein | |||
| plasmid unnamed5 | ||||
| 25720 | recombination-associated protein RdgC | |||
| 25725 | M | M.EcoSanORF25945P (100% identity) | M.Ecoppa8ORF25725P | |
| 25740 | SPFH/Band 7/PHB domain protein | |||