Escherichia coli NDM7 |
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Putative Escherichia coli NDM7 RM systems
Ref: Simner,P. et al. unpublished
REBASE ref # 33390
| Sequence length: | GenBank #: | |
| Chromosome: | 4,738,059 bp | CP085372 |
| plasmid unnamed: | 30,698 bp | CP085384 |
| plasmid unnamed3: | 169,917 bp | CP085378 |
REBASE acronym: EcoNDM7
Org_num: 53819
All begin LCE28_
| Type I | ||||
|---|---|---|---|---|
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| 13850 | IS1 family transposase | |||
| 13855 | R | EcosNDM5ORF9185P (100% identity) | EcoNDM7ORF13855P | |
| 13860 | M48 family metallopeptidase | |||
| 22130 | GTPase family protein | |||
| 22135 | M | M.Sso8ORF17680P (100% identity) | AAAYNNNNNCTC | M.EcoNDM7ORF22135P |
| 22140 | S | S.EcosNDM5ORF17455P (100% identity) | AAAYNNNNNCTC | S.EcoNDM7ORF22135P |
| 22145 | R | Sso8ORF17680P (100% identity) | AAAYNNNNNCTC | EcoNDM7ORF22135P |
| 22150 | IS5 family transposase | |||
| Type II | ||||
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| 4935 | ProQ/FinO family protein | |||
| 4940 | M | M.SflFF24DndBP (100% identity) | M.EcoNDM7DndBP | |
| 4945 | DNA phosphorothioation system sulfurtransferase | |||
| 4940 | DNA sulfur modification protein DndB | |||
| 4945 | M | M.SflFF24DndCP (100% identity) | M.EcoNDM7DndCP | |
| 4950 | DNA sulfur modification protein DndD | |||
| 4945 | DNA phosphorothioation system sulfurtransferase | |||
| 4950 | M | M.SflFF24DndDP (100% identity) | M.EcoNDM7DndDP | |
| 4955 | DNA sulfur modification protein DndE | |||
| 4950 | DNA sulfur modification protein DndD | |||
| 4955 | M | M.SflFF24DndEP (100% identity) | M.EcoNDM7DndEP | |
| 4960 | DNA phosphorothioation-associated DGQHR protein | |||
| 4965 | 172 aa hypothetical protein | |||
| 4970 | R | Sen8497DptHP (100% identity) | EcoNDM7DptHP | |
| 4975 | DNA phosphorothioation-dependent restriction | |||
| 4970 | DNA phosphorothioation-dependent restriction | |||
| 4975 | R | Sen8497DptGP (100% identity) | EcoNDM7DptGP | |
| 4980 | DNA phosphorothioation-dependent restriction | |||
| 4975 | DNA phosphorothioation-dependent restriction | |||
| 4980 | R | SenLY67DptFP (100% identity) | EcoNDM7DptFP | |
| 4985 | integrase | |||
| 6420 | cell division protein DamX | |||
| 6425 | M | M.UbaC1152DamP (100% identity) | GATC | M.EcoNDM7DamP |
| 6430 | ribulose-phosphate 3-epimerase | |||
| 7045 | 0 aa hypothetical protein | |||
| 7050 | M | M.Sso8ORF2545P (100% identity) | ATGCAT | M.EcoNDM7ORF7050P |
| 7055 | DNA-binding transcriptional regulator Fis | |||
| 13535 | phosphohydrolase | |||
| 13540 | M | M.EcosNDM5DcmP (100% identity) | CCWGG | M.EcoNDM7DcmP |
| 13545 | V | V.SsoSE61DcmP (100% identity) | CCWGG | V.EcoNDM7DcmP |
| 13550 | drug/metabolite exporter YedA | |||
| 22355 | LexA family transcriptional regulator | |||
| 22360 | M | M.Sso8ORF17910P (100% identity) | GATC | M.EcoNDM7ORF22360P |
| 22365 | PerC family transcriptional regulator | |||
| 24220 | HNH endonuclease | |||
| 24225 | R | Sso8ORF19860P (100% identity) | EcoNDM7ORF24225P | |
| 24230 | 55 aa hypothetical protein | |||
| plasmid unnamed | ||||
| 29910 | 26 aa hypothetical protein | |||
| 29915 | M | M.Sso8ORF2545P (100% identity) | ATGCAT | M.EcoNDM7ORF29915P |
| 29920 | DNA-binding transcriptional regulator Fis | |||
| plasmid unnamed3 | ||||
| 29000 | 73 aa hypothetical protein | |||
| 29005 | M | M.Sso8ORF23800P (100% identity) | SAY | M.EcoNDM7ORF29005P |
| 29010 | 103 aa hypothetical protein | |||