Escherichia coli P31_YH1_02.21 |
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Putative Escherichia coli P31_YH1_02.21 RM systems
Ref: Turton,J.F. and Turton,J.A. unpublished
REBASE ref # 27272
| Sequence length: | GenBank #: | |
| Chromosome: | 5,190,359 bp | CP085063 |
| plasmid pNDM_P31_YH1_02.21: | 133,958 bp | CP085064 |
| plasmid unnamed1: | 94,191 bp | CP085065 |
REBASE acronym: Eco10221
Org_num: 53867
All begin LH370_
| Type I | ||||
|---|---|---|---|---|
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| 12010 | adenine/cytosine-specific restriction | |||
| 12015 | R | EcosS1ORF16790P (100% identity) | CCANNNNNNNCTTC | Eco10221ORF12020P |
| 12020 | M | M.EcosS1ORF16790P (100% identity) | CCANNNNNNNCTTC | M.Eco10221ORF12020P |
| 12025 | S | S.EcosS1ORF16790P (100% identity) | CCANNNNNNNCTTC | S.Eco10221ORF12020P |
| 12030 | endoribonuclease SymE | |||
| 14065 | IS3-like element ISSen4 family transposase | |||
| 14070 | R | EcotcmA3ORF16550P (100% identity) | Eco10221ORF14090P | |
| 14075 | DNA-protecting protein DprA | |||
| 14080 | RecQ family ATP-dependent DNA helicase | |||
| 14085 | S | S.EcotcmA3ORF16550P (100% identity) | S.Eco10221ORF14090P | |
| 14090 | M | M.Pre393ORF2750P (100% identity) | M.Eco10221ORF14090P | |
| 14095 | helix-turn-helix domain-containing protein | |||
| plasmid unnamed1 | ||||
| 25910 | ead/Ea22-like family protein | |||
| 25915 | R | Eco11106ORF57P (99% identity) | Eco10221ORF25925P | |
| 25920 | S | S.EcoMB50ORF22700P (65% identity) | S.Eco10221ORF25925P | |
| 25925 | M | M.Ecosa7ORFFP (99% identity) | M.Eco10221ORF25925P | |
| 25930 | type II toxin-antitoxin system Phd/YefM family | |||
| Type II | ||||
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| 17880 | cell division protein DamX | |||
| 17885 | M | M.SspPIBDamP (100% identity) | GATC | M.Eco10221DamP |
| 17890 | ribulose-phosphate 3-epimerase | |||
| 18410 | DUF2556 family protein | |||
| 18415 | M | M.EcosS1ORF18905P (100% identity) | ATGCAT | M.Eco10221ORF18415P |
| 18420 | DNA-binding transcriptional regulator Fis | |||
| 22510 | serine/threonine protein phosphatase | |||
| 22515 | M | M.EcosS1ORF2855P (100% identity) | M.Eco10221ORF22515P | |
| 22520 | PerC family transcriptional regulator | |||
| plasmid pNDM_P31_YH1_02.21 | ||||
| 25640 | 73 aa hypothetical protein | |||
| 25645 | M | M.UbapRSB107ORFAP (100% identity) | SAY | M.Eco10221ORF25645P |
| 25650 | 103 aa hypothetical protein | |||
| plasmid unnamed1 | ||||
| 26260 | 95 aa hypothetical protein | |||
| 26265 | M | M.EcoEC361ORF1680P (100% identity) | M.Eco10221ORF26265P | |
| 26270 | 206 aa hypothetical protein | |||
| Type IV | ||||
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| 12005 | GTPase | |||
| 12010 | R | EcosS1MrrP (100% identity) | Eco10221MrrP | |
| 12015 | type I restriction-modification system | |||