Escherichia coli P24_WM1_05.20 |
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Putative Escherichia coli P24_WM1_05.20 RM systems
Ref: Turton,J.F. and Turton,J.A. unpublished
REBASE ref # 27272
| Sequence length: | GenBank #: | |
| Chromosome: | 4,892,148 bp | CP085056 |
| plasmid pNDM_P24_WM1_05.20: | 85,542 bp | CP085059 |
| plasmid unnamed1: | 118,805 bp | CP085057 |
| plasmid unnamed2: | 92,591 bp | CP085058 |
REBASE acronym: Eco10520
Org_num: 53864
All begin LHK10_
| Type I | ||||
|---|---|---|---|---|
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| 5640 | IS1 family transposase | |||
| 5645 | R | Sen12509ORF5865P (100% identity) | ACAYNNNNCTG | Eco10520ORF5655P |
| 5650 | S | S.Sen12509ORF5865P (100% identity) | ACAYNNNNCTG | S.Eco10520ORF5655P |
| 5655 | M | M.SenS688ORF13495P (100% identity) | ACAYNNNNCTG | M.Eco10520ORF5655P |
| 5660 | integrase core domain-containing protein | |||
| 17895 | GTPase family protein | |||
| 17900 | M | M.EcoM70ORF22640P (100% identity) | M.Eco10520ORF17900P | |
| 17905 | S | S.EcoM70ORF22640P (100% identity) | S.Eco10520ORF17900P | |
| 17910 | AAA family ATPase | |||
| 17915 | R | EcoM70ORF22640P (100% identity) | Eco10520ORF17900P | |
| 17920 | 105 aa hypothetical protein | |||
| 18075 | EF-P beta-lysylation protein EpmB | |||
| 18080 | M | M.Sen8497ORF2259P (100% identity) | M.Eco10520ORF18080P | |
| 18085 | Rpn family recombination-promoting | |||
| Type II | ||||
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| 2480 | DUF2556 family protein | |||
| 2485 | M | M.Ssp28760ORF20045P (100% identity) | ATGCAT | M.Eco10520ORF2485P |
| 2490 | DNA-binding transcriptional regulator Fis | |||
| 9330 | phosphohydrolase | |||
| 9335 | M | M.SflSTLE1DcmP (100% identity) | CCWGG | M.Eco10520DcmP |
| 9340 | V | V.SflFF64DcmP (100% identity) | CCWGG | V.Eco10520DcmP |
| 9345 | drug/metabolite exporter YedA | |||
| 21020 | 555 aa hypothetical protein | |||
| 21025 | R | EcosS3ORF15775P (100% identity) | Eco10520ORF21030P | |
| 21030 | M | M.EcosS3ORF15775P (100% identity) | M.Eco10520ORF21030P | |
| 21035 | conjugal transfer protein TraG N-terminal | |||
| plasmid pNDM_P24_WM1_05.20 | ||||
| 24990 | 102 aa hypothetical protein | |||
| 24995 | M | M.Eco2930ORF60P (98% identity) | M.Eco10520ORF24995P | |
| 25000 | 73 aa hypothetical protein | |||
| plasmid unnamed1 | ||||
| 24155 | 73 aa hypothetical protein | |||
| 24160 | M | M.KpnVA569ORF28145P (100% identity) | M.Eco10520ORF24160P | |
| 24165 | 103 aa hypothetical protein | |||
| plasmid unnamed2 | ||||
| 24770 | SPFH/Band 7/PHB domain protein | |||
| 24785 | M | M.EcoS448ORF28070P (99% identity) | M.Eco10520ORF24785P | |
| 24790 | recombination-associated protein RdgC | |||
| Type IV | ||||
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| 13350 | NADP-dependent isocitrate dehydrogenase | |||
| 13355 | R | EcosEC27McrCP (100% identity) | Eco10520McrCP | |
| 13360 | R | EcoteDMcrBP (100% identity) | Eco10520McrBP | |
| 13365 | recombinase family protein | |||