Escherichia coli EC20 |
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Putative Escherichia coli EC20 RM systems
Ref: Huang,J. unpublished
REBASE ref # 24830
| Sequence length: | GenBank #: | |
| Chromosome: | 4,856,296 bp | CP084900 |
| plasmid pEC22-CTX-M-15: | 231,954 bp | CP084901 |
| plasmid pEC22-OXA-1: | 169,208 bp | CP084902 |
REBASE acronym: EcoEC20
Org_num: 53759
All begin
| Type I | ||||
|---|---|---|---|---|
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| ??? | M | M.EcoYJ4ORFEP (100% identity) | AAAYNNNNNNCTC | M.EcoEC20ORFHP |
| ??? | S | S.Sfl877II (100% identity) | AAAYNNNNNNCTC | S.EcoEC20ORFHP |
| ??? | R | Sfl877IIP (100% identity) | AAAYNNNNNNCTC | EcoEC20ORFHP |
| Type II | ||||
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| ??? | M | M.Ssp28760ORF20045P (100% identity) | ATGCAT | M.EcoEC20ORFCP |
| ??? | M | M.EcosEC5DcmP (100% identity) | CCWGG | M.EcoEC20DcmP |
| ??? | V | V.EcoW56DcmP (100% identity) | V.EcoEC20DcmP | |
| ??? | M | M1.EcoTH03ORF9340P (97% identity) | M1.EcoEC20ORFFP | |
| ??? | M | M2.EcoTH03ORF9340P (63% identity) | M2.EcoEC20ORFFP | |
| ??? | R | Sso8033ORF3755P (100% identity) | CCWGG | EcoEC20ORFGP |
| ??? | M | M.Sfl426ORFAP (100% identity) | CCWGG | M.EcoEC20ORFGP |
| plasmid pEC22-CTX-M-15 | ||||
| ??? | M | M.YpsF1ORFCP (100% identity) | CCWGG | M.EcoEC20ORFAP |
| ??? | M | M.YpsF1ORFBP (100% identity) | M.EcoEC20ORFDP | |
| ??? | M | M.YpsF1ORFDP (100% identity) | GATC | M.EcoEC20ORFEP |
| plasmid pEC22-OXA-1 | ||||
| ??? | M | M.KpnVA569ORF28145P (100% identity) | M.EcoEC20ORFBP | |