Escherichia coli O157:H7 Vac_07.1 |
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Putative Escherichia coli O157:H7 Vac_07.1 RM systems
Ref: Amadio,A.F. et al. unpublished
REBASE ref # 33396
| Sequence length: | GenBank #: | |
| Chromosome: | 5,425,421 bp | CP076241 |
| plasmid pO157: | 94,989 bp | CP076242 |
REBASE acronym: EcoVac071
Org_num: 53853
All begin JKN65_
| Type I | ||||
|---|---|---|---|---|
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| 23785 | DUF262 domain-containing protein | |||
| 23790 | R | Ecos1613ORF27060P (100% identity) | CACNNNNNNNCTGG | EcoVac071ORF23795P |
| 23795 | M | M.EcosPA8ORF17615P (100% identity) | CACNNNNNNNCTGG | M.EcoVac071ORF23795P |
| 23800 | S | S.EcosPA8ORF17615P (100% identity) | CACNNNNNNNCTGG | S.EcoVac071ORF23795P |
| 23805 | endoribonuclease SymE | |||
| Type II | ||||
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| 2900 | DUF2556 family protein | |||
| 2905 | M | M.EcosPA8ORF11510P (100% identity) | ATGCAT | M.EcoVac071ORF2905P |
| 2910 | DNA-binding transcriptional regulator Fis | |||
| 7755 | recombination protein NinB | |||
| 7760 | M | M.SflN97ORF15810P (100% identity) | GATC | M.EcoVac071ORF7760P |
| 7765 | NinE family protein | |||
| 10425 | recombination protein NinB | |||
| 10430 | M | M.Eph2851ORFAP (100% identity) | GATC | M.EcoVac071ORF10430P |
| 10435 | NinE family protein | |||
| 11250 | phosphohydrolase | |||
| 11255 | M | M.SflLIN6DcmP (100% identity) | CCWGG | M.EcoVac071DcmP |
| 11260 | V | V.EcosPA8DcmP (100% identity) | CCWGG | V.EcoVac071DcmP |
| 11265 | drug/metabolite exporter YedA | |||
| 15140 | DUF1737 domain-containing protein | |||
| 15155 | M | M.EcosPA8ORF27255P (100% identity) | M.EcoVac071ORF15155P | |
| 15160 | TrmB family transcriptional regulator | |||
| 24020 | RM | EcosPA8ORF17390P (100% identity) | GAAABCC | EcoVac071ORF24020P |
| 24025 | DEAD/DEAH box helicase | |||
| 24055 | N-acetylneuraminic acid mutarotase | |||
| 24060 | R | EcosPA8ORF17350P (100% identity) | EcoVac071ORF24060P | |
| 24065 | transposase | |||
| plasmid pO157 | ||||
| 27180 | 101 aa hypothetical protein | |||
| 27185 | M | M.EcosPA8ORF27775P (100% identity) | M.EcoVac071ORF27185P | |
| 27190 | 73 aa hypothetical protein | |||
| Type IV | ||||
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| 23805 | endoribonuclease SymE | |||
| 23810 | R | EcosPA8GmrSDP (55% identity) | EcoVac071GmrDP | |
| 23815 | R | Ecos1613GmrSP (100% identity) | EcoVac071GmrSP | |
| 23820 | DUF1127 domain-containing protein | |||