Escherichia coli NDM5 |
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Putative Escherichia coli NDM5 RM systems
Ref: Simner,P. et al. unpublished
REBASE ref # 33390
| Sequence length: | GenBank #: | |
| Chromosome: | 4,758,344 bp | CP083872 |
| plasmid unnamed3: | 170,625 bp | CP083875 |
REBASE acronym: EcosNDM5
Org_num: 53817
All begin LCE27_
| Type I | ||||
|---|---|---|---|---|
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| 9180 | IS1 family transposase | |||
| 9185 | R | Ecop10BORF9455P (100% identity) | EcosNDM5ORF9185P | |
| 9190 | M48 family metallopeptidase | |||
| 17450 | GTPase family protein | |||
| 17455 | M | M.Sso8ORF17680P (100% identity) | AAAYNNNNNCTC | M.EcosNDM5ORF17455P |
| 17460 | S | S.EcoYDC107ORF3527P (100% identity) | AAAYNNNNNCTC | S.EcosNDM5ORF17455P |
| 17465 | R | Sso8ORF17680P (100% identity) | AAAYNNNNNCTC | EcosNDM5ORF17455P |
| 17470 | IS5 family transposase | |||
| Type II | ||||
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| 265 | ProQ/FinO family protein | |||
| 270 | M | M.SflFF24DndBP (100% identity) | M.EcosNDM5DndBP | |
| 275 | DNA phosphorothioation system sulfurtransferase | |||
| 270 | DNA sulfur modification protein DndB | |||
| 275 | M | M.SflFF24DndCP (100% identity) | M.EcosNDM5DndCP | |
| 280 | DNA sulfur modification protein DndD | |||
| 275 | DNA phosphorothioation system sulfurtransferase | |||
| 280 | M | M.SflFF24DndDP (100% identity) | M.EcosNDM5DndDP | |
| 285 | DNA sulfur modification protein DndE | |||
| 280 | DNA sulfur modification protein DndD | |||
| 285 | M | M.SflFF24DndEP (100% identity) | M.EcosNDM5DndEP | |
| 290 | DNA phosphorothioation-associated DGQHR protein | |||
| 295 | 172 aa hypothetical protein | |||
| 300 | R | Sen8497DptHP (100% identity) | EcosNDM5DptHP | |
| 305 | DNA phosphorothioation-dependent restriction | |||
| 300 | DNA phosphorothioation-dependent restriction | |||
| 305 | R | Sen8497DptGP (100% identity) | EcosNDM5DptGP | |
| 310 | DNA phosphorothioation-dependent restriction | |||
| 305 | DNA phosphorothioation-dependent restriction | |||
| 310 | R | SenLY67DptFP (100% identity) | EcosNDM5DptFP | |
| 315 | integrase | |||
| 1750 | cell division protein DamX | |||
| 1755 | M | M.UbaC1152DamP (100% identity) | GATC | M.EcosNDM5DamP |
| 1760 | ribulose-phosphate 3-epimerase | |||
| 8865 | phosphohydrolase | |||
| 8870 | M | M.Ecos3057DcmP (100% identity) | CCWGG | M.EcosNDM5DcmP |
| 8875 | V | V.SsoSE61DcmP (100% identity) | CCWGG | V.EcosNDM5DcmP |
| 8880 | drug/metabolite exporter YedA | |||
| 17675 | LexA family transcriptional regulator | |||
| 17680 | M | M.Sso8ORF17910P (100% identity) | GATC | M.EcosNDM5ORF17680P |
| 17685 | PerC family transcriptional regulator | |||
| 19540 | HNH endonuclease | |||
| 19545 | R | Sso8ORF19860P (100% identity) | EcosNDM5ORF19545P | |
| 19550 | 55 aa hypothetical protein | |||
| plasmid unnamed3 | ||||
| 24020 | 73 aa hypothetical protein | |||
| 24025 | M | M.Sso8ORF23800P (100% identity) | SAY | M.EcosNDM5ORF24025P |
| 24030 | 103 aa hypothetical protein | |||