Escherichia coli NDM6 |
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Putative Escherichia coli NDM6 RM systems
Ref: Simner,P. et al. unpublished
REBASE ref # 33390
| Sequence length: | GenBank #: | |
| Chromosome: | 4,737,147 bp | CP083869 |
| plasmid unnamed1: | 224,320 bp | CP083867 |
REBASE acronym: EcoNDM6
Org_num: 53818
All begin LCE24_
| Type I | ||||
|---|---|---|---|---|
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| 10650 | IS1 family transposase | |||
| 10655 | R | EcosNDM5ORF9185P (100% identity) | EcoNDM6ORF10655P | |
| 10660 | M48 family metallopeptidase | |||
| 18920 | GTPase family protein | |||
| 18925 | M | M.Sso8ORF17680P (100% identity) | AAAYNNNNNCTC | M.EcoNDM6ORF18925P |
| 18930 | S | S.EcosNDM5ORF17455P (100% identity) | AAAYNNNNNCTC | S.EcoNDM6ORF18925P |
| 18935 | R | Sso8ORF17680P (100% identity) | AAAYNNNNNCTC | EcoNDM6ORF18925P |
| 18940 | IS5 family transposase | |||
| Type II | ||||
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| 1735 | ProQ/FinO family protein | |||
| 1740 | M | M.SflFF24DndBP (100% identity) | M.EcoNDM6DndBP | |
| 1745 | DNA phosphorothioation system sulfurtransferase | |||
| 1740 | DNA sulfur modification protein DndB | |||
| 1745 | M | M.SflFF24DndCP (100% identity) | M.EcoNDM6DndCP | |
| 1750 | DNA sulfur modification protein DndD | |||
| 1745 | DNA phosphorothioation system sulfurtransferase | |||
| 1750 | M | M.SflFF24DndDP (100% identity) | M.EcoNDM6DndDP | |
| 1755 | DNA sulfur modification protein DndE | |||
| 1750 | DNA sulfur modification protein DndD | |||
| 1755 | M | M.SflFF24DndEP (100% identity) | M.EcoNDM6DndEP | |
| 1760 | DNA phosphorothioation-associated DGQHR protein | |||
| 1765 | 172 aa hypothetical protein | |||
| 1770 | R | Sen8497DptHP (100% identity) | EcoNDM6DptHP | |
| 1775 | DNA phosphorothioation-dependent restriction | |||
| 1770 | DNA phosphorothioation-dependent restriction | |||
| 1775 | R | Sen8497DptGP (100% identity) | EcoNDM6DptGP | |
| 1780 | DNA phosphorothioation-dependent restriction | |||
| 1775 | DNA phosphorothioation-dependent restriction | |||
| 1780 | R | SenLY67DptFP (100% identity) | EcoNDM6DptFP | |
| 1785 | integrase | |||
| 3845 | 26 aa hypothetical protein | |||
| 3850 | M | M.Sso8ORF2545P (100% identity) | ATGCAT | M.EcoNDM6ORF3850P |
| 3855 | DNA-binding transcriptional regulator Fis | |||
| 10335 | phosphohydrolase | |||
| 10340 | M | M.EcosNDM5DcmP (100% identity) | CCWGG | M.EcoNDM6DcmP |
| 10345 | V | V.SsoSE61DcmP (100% identity) | CCWGG | V.EcoNDM6DcmP |
| 10350 | drug/metabolite exporter YedA | |||
| 19145 | LexA family transcriptional regulator | |||
| 19150 | M | M.Sso8ORF17910P (100% identity) | GATC | M.EcoNDM6ORF19150P |
| 19155 | PerC family transcriptional regulator | |||
| 21010 | HNH endonuclease | |||
| 21015 | R | Sso8ORF19860P (100% identity) | EcoNDM6ORF21015P | |
| 21020 | 55 aa hypothetical protein | |||
| plasmid unnamed1 | ||||
| 485 | 103 aa hypothetical protein | |||
| 490 | M | M.Sso8ORF23800P (100% identity) | SAY | M.EcoNDM6ORF490P |
| 495 | 73 aa hypothetical protein | |||