Escherichia fergusonii 5zf15-2-1 |
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Putative Escherichia fergusonii 5zf15-2-1 RM systems
Ref: Liu,R. unpublished
REBASE ref # 31256
| Sequence length: | GenBank #: | |
| Chromosome: | 4,934,492 bp | CP079891 |
| plasmid p15ZF15-2-1: | 110,545 bp | CP079892 |
REBASE acronym: Efe1521
Org_num: 53971
All begin KYD87_
| Type I | ||||
|---|---|---|---|---|
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| 5475 | GTPase family protein | |||
| 5480 | M | M.SflN97ORF14060P (100% identity) | M.Efe1521ORF24640P | |
| 5485 | S | S.SflN97ORF14060P (100% identity) | S.Efe1521ORF24640P | |
| 5490 | R | SflN97ORF14060P (99% identity) | Efe1521ORF24640P | |
| 5495 | IS1 family transposase | |||
| 12115 | IS3 family transposase | |||
| 12120 | R | KpnF891ORF23410P (99% identity) | Efe1521ORF12130P | |
| 12125 | M48 family metallopeptidase | |||
| 12130 | M | M.KpnF891ORF23410P (100% identity) | M.Efe1521ORF12130P | |
| 12135 | S | S.KpnF891ORF23410P (100% identity) | S.Efe1521ORF12130P | |
| 12140 | 62 aa hypothetical protein | |||
| plasmid p15ZF15-2-1 | ||||
| 24635 | DNA polymerase III subunit theta | |||
| 24640 | M | M.SflN97ORF14060P (100% identity) | M.Efe1521ORF24640P | |
| 24645 | S | S.SflN97ORF14060P (100% identity) | S.Efe1521ORF24640P | |
| 24650 | R | SflN97ORF14060P (99% identity) | Efe1521ORF24640P | |
| 24655 | 158 aa hypothetical protein | |||
| Type II | ||||
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| 4415 | NinE family protein | |||
| 4420 | M | M.Ecosa7ORFEP (94% identity) | GATC | M.Efe1521ORF4420P |
| 4425 | recombination protein NinB | |||
| 12015 | RM | Efe65411ORF19340P (100% identity) | Efe1521ORF12015P | |
| 12020 | DEAD/DEAH box helicase | |||
| 12050 | N-acetylneuraminic acid mutarotase | |||
| 12055 | R | Efe65411ORF19380P (100% identity) | Efe1521ORF12055P | |
| 12060 | peptidase | |||
| 12790 | DNA-binding transcriptional regulator Fis | |||
| 12795 | M | M.EfeTORF37040P (100% identity) | ATGCAT | M.Efe1521ORF12795P |
| 12800 | DUF2556 family protein | |||
| 13315 | ribulose-phosphate 3-epimerase | |||
| 13320 | M | M.EfeTDamP (100% identity) | GATC | M.Efe1521DamP |
| 13325 | cell division protein DamX | |||
| 16940 | bifunctional isocitrate dehydrogenase | |||
| 16945 | M | M.EfeC10ORF1445P (100% identity) | CCWGG | M.Efe1521ORF16945P |
| 16950 | glyoxylate bypass operon transcriptional | |||
| 18540 | PerC family transcriptional regulator | |||
| 18545 | M | M.Sso90ORF15820P (100% identity) | GATC | M.Efe1521ORF18545P |
| 18550 | LexA family transcriptional regulator | |||
| 18580 | 67 aa hypothetical protein | |||
| 18585 | M | M.Sso63633ORF22290P (100% identity) | M.Efe1521ORF18585P | |
| 18590 | phage lysis protein EssD | |||
| 22640 | flagella biosynthesis regulator Flk | |||
| 22645 | M | M.Efe65411ORF7205P (100% identity) | M.Efe1521ORF22645P | |
| 22650 | Com family DNA-binding transcriptional | |||
| 23660 | TraR/DksA family transcriptional regulator | |||
| 23665 | M | M.SflP099ORF15630P (98% identity) | GATC | M.Efe1521ORF23665P |
| 23670 | replication endonuclease | |||
| Type IV | ||||
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| 5650 | IS5 family transposase | |||
| 5655 | R | SflN97McrCP (99% identity) | Efe1521McrCP | |
| 5660 | R | SflN97McrBP (100% identity) | Efe1521McrBP | |
| 5665 | zinc-ribbon domain-containing protein | |||
| Orphan M | ||||
| ORF | Gene | Most similar | Specificity | Name |
| plasmid p15ZF15-2-1 | ||||
| 24690 | 76 aa hypothetical protein | |||
| 24695 | M | M.Sso524ORF460P (100% identity) | GATC | M.Efe1521ORF24695P |
| 24700 | 269 aa hypothetical protein | |||