Escherichia coli CT02 |
| [index] - [schematics] - [save as Word doc] |
|
|
|
Putative Escherichia coli CT02 RM systems
Ref: Yang,X. et al. unpublished
REBASE ref # 33263
| Sequence length: | GenBank #: | |
| Chromosome: | 4,777,845 bp | CP081698 |
| plasmid unnamed1: | 145,356 bp | CP081699 |
REBASE acronym: EcoCT02
Org_num: 53670
All begin J6N91_
| Type I | ||||
|---|---|---|---|---|
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| 9470 | 388 aa hypothetical protein | |||
| 9475 | M | M.Eco0304ORF10125P (100% identity) | M.EcoCT02ORF9475P | |
| 9480 | S | S.Eco0304ORF10125P (100% identity) | S.EcoCT02ORF9475P | |
| 9485 | YecA family protein | |||
| 9490 | R | Eco0304ORF10125P (100% identity) | EcoCT02ORF9475P | |
| 9495 | M48 family metallopeptidase | |||
| 19680 | adenine/cytosine-specific restriction | |||
| 19685 | R | Ecos15955ORF12100P (100% identity) | RTCANNNNNNNCTTC | EcoCT02ORF19690P |
| 19690 | M | M.Ecos15955ORF12100P (100% identity) | RTCANNNNNNNCTTC | M.EcoCT02ORF19690P |
| 19695 | S | S.Ecos15955ORF12100P (100% identity) | RTCANNNNNNNCTTC | S.EcoCT02ORF19690P |
| 19700 | endoribonuclease SymE | |||
| plasmid unnamed1 | ||||
| 23535 | type II toxin-antitoxin system Phd/YefM family | |||
| 23540 | M | M.Eco13384I (100% identity) | ACANNNNNNNTTAC | M.EcoCT02ORF23540P |
| 23545 | S | S.Eco13384I (100% identity) | ACANNNNNNNTTAC | S.EcoCT02ORF23540P |
| 23550 | R | Eco13384IP (100% identity) | ACANNNNNNNTTAC | EcoCT02ORF23540P |
| 23555 | 3-phosphatase | |||
| Type II | ||||
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| 2395 | DUF2556 family protein | |||
| 2400 | M | M.EcoW102ORF2375P (100% identity) | ATGCAT | M.EcoCT02ORF2400P |
| 2405 | DNA-binding transcriptional regulator Fis | |||
| 9125 | phosphohydrolase | |||
| 9130 | M | M.Ecos67DcmP (100% identity) | CCWGG | M.EcoCT02DcmP |
| 9135 | V | V.Ecos195DcmP (100% identity) | V.EcoCT02DcmP | |
| 9140 | drug/metabolite exporter YedA | |||
| 17985 | LexA family transcriptional regulator | |||
| 17990 | M | M.Sso7924ORF2966P (100% identity) | GATC | M.EcoCT02ORF17990P |
| 17995 | PerC family transcriptional regulator | |||
| Type IV | ||||
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| 19675 | GTPase | |||
| 19680 | R | Ssp28760MrrP (100% identity) | EcoCT02MrrP | |
| 19685 | type I restriction-modification system | |||