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Putative Raoultella planticola JBIWA001 RM systems
Ref: Gomi,R. unpublished
REBASE ref # 32053
Sequence length: | GenBank #: | |
Chromosome: | 5,626,881 bp | CP074182 |
plasmid pJBIWA001_1: | 136,413 bp | CP074183 |
plasmid pJBIWA001_2: | 129,579 bp | CP074184 |
plasmid pJBIWA001_3: | 110,557 bp | CP074185 |
plasmid pJBIWA001_5: | 32,930 bp | CP074187 |
plasmid pJBIWA001_8: | 4,906 bp | CP074190 |
REBASE acronym: RplWA001
Org_num: 55070
All begin KGP19_
Type I | ||||
---|---|---|---|---|
ORF | Gene | Most similar | Specificity | Name |
Chromosome | ||||
24570 | restriction system-associated AAA family ATPase | |||
24575 | S | S.Kox493ORF27300P (100% identity) | GAGNNNNNNNTGGC | S.RplWA001ORF24580P |
24580 | M | M.Kox493ORF27300P (100% identity) | GAGNNNNNNNTGGC | M.RplWA001ORF24580P |
24585 | molybdopterin-guanine dinucleotide biosynthesis | |||
plasmid pJBIWA001_1 | ||||
26960 | YkgJ family cysteine cluster protein | |||
26965 | M | M.KpnNDM1ORF21860P (100% identity) | M.RplWA001ORF26965P | |
26970 | S | S.KpnNDM1ORF21860P (100% identity) | S.RplWA001ORF26965P | |
26975 | R | KpnNDM1ORF21860P (100% identity) | RplWA001ORF26965P | |
26980 | ISL3 family transposase | |||
Type II | ||||
ORF | Gene | Most similar | Specificity | Name |
Chromosome | ||||
1860 | cell division protein DamX | |||
1865 | M | M.RplzwDamP (100% identity) | GATC | M.RplWA001DamP |
1870 | ribulose-phosphate 3-epimerase | |||
6275 | 63 aa hypothetical protein | |||
6280 | M | M.EcoE47ORF6440P (88% identity) | M.RplWA001ORF6280P | |
6285 | PerC family transcriptional regulator | |||
6330 | 68 aa hypothetical protein | |||
6335 | M | M.Kpn9644ORF3352P (91% identity) | M.RplWA001ORF6335P | |
6340 | DNA replication domain protein | |||
6350 | 258 aa hypothetical protein | |||
6355 | M | M.Rpl9528ORF4689P (98% identity) | M.RplWA001ORF6355P | |
6360 | 87 aa hypothetical protein | |||
9190 | phosphohydrolase | |||
9195 | M | M.RplS62DcmP (100% identity) | M.RplWA001DcmP | |
9200 | V | V.RplS62DcmP (100% identity) | V.RplWA001DcmP | |
9205 | drug/metabolite exporter YedA | |||
9385 | 158 aa hypothetical protein | |||
9390 | M | M1.Rpl10263ORF590P (92% identity) | M.RplWA001ORF9390P | |
9395 | DNA cytosine methyltransferase | |||
9390 | class I SAM-dependent methyltransferase | |||
9395 | M | M2.Rpl10263ORF590P (91% identity) | M.RplWA001ORF9395P | |
9400 | 112 aa hypothetical protein | |||
12715 | DUF968 domain-containing protein | |||
12720 | M | M1.KpnH165ORFBP (100% identity) | M.RplWA001ORF12720P | |
12725 | DNA cytosine methyltransferase | |||
12720 | phage N-6-adenine-methyltransferase | |||
12725 | M | M2.KpnH165ORFBP (100% identity) | M.RplWA001ORF12725P | |
12730 | YlcG family protein | |||
16550 | 64 aa hypothetical protein | |||
16555 | M | M.RplHH15ORF16610P (99% identity) | M.RplWA001ORF16555P | |
16560 | 3-5 exoribonuclease | |||
plasmid pJBIWA001_1 | ||||
27030 | 67 aa hypothetical protein | |||
27035 | M | M.SmaBWH35ORF25885P (100% identity) | M.RplWA001ORF27035P | |
27040 | 73 aa hypothetical protein | |||
plasmid pJBIWA001_2 | ||||
27825 | 64 aa hypothetical protein | |||
27830 | M | M.RorFF15ORF27080P (100% identity) | M.RplWA001ORF27830P | |
27835 | 73 aa hypothetical protein | |||
plasmid pJBIWA001_3 | ||||
28765 | 73 aa hypothetical protein | |||
28770 | M | M.SmaBWH35ORF25885P (100% identity) | M.RplWA001ORF28770P | |
28775 | 76 aa hypothetical protein | |||
plasmid pJBIWA001_5 | ||||
29585 | recombinase family protein | |||
29590 | M | M.KspRE03ORF30260P (100% identity) | CCCGGG | M.RplWA001ORF29590P |
29595 | R | R2.Ksp52244ORF30170P (100% identity) | CCCGGG | RplWA001ORF29590P |
29600 | AAA family ATPase | |||
plasmid pJBIWA001_8 | ||||
29745 | plasmid mobilization relaxosome protein MobC | |||
29750 | M | M.KpnN68ORF26425P (99% identity) | M.RplWA001ORF29750P |