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Putative Frankia species CcI3 RM systems
Ref: Normand,P. et al. Genome Res. 17 (1), 7-15 (2007)
REBASE ref # 9650
Complete sequence: 5,433,628 bp
GenBank #: CP000249 (NC_007777)
REBASE acronym: FspC
Org_num: 4271
All begin Francci3_
Type I | ||||
---|---|---|---|---|
ORF | Gene | Most similar | Specificity | Name |
191 | IS630 family transposase | |||
192 | M | M.FspThrORF677P (100% identity) | M.FspCORF192P | |
193 | S | S.FspThrORF677P (100% identity) | S.FspCORF192P | |
194 | R | FspThrORF677P (100% identity) | FspCORF192P | |
195 | pseudogene | |||
4010 | protein of unknown function DUF45 | |||
4011 | R | FspThrORF4613P (100% identity) | FspCORF4014P | |
4012 | S | S.FspThrORF4613P (100% identity) | S.FspCORF4014P | |
4013 | transposase, IS4 family | |||
4014 | M | M.FspThrORF2585P (100% identity) | M.FspCORF4014P | |
4015 | UBA/THIF-type NAD/FAD binding fold | |||
Type II | ||||
ORF | Gene | Most similar | Specificity | Name |
1101 | 132 aa hypothetical protein | |||
1102 | RM | FspThrORF4559P (100% identity) | FspCORF1101P | |
1103 | 199 aa hypothetical protein | |||
2344 | phage integrase | |||
2345 | M | M.FspThrORF1200P (100% identity) | CCCGGG | M.FspCORF2345P |
2346 | 105 aa hypothetical protein | |||
2673 | serine/threonine protein kinase | |||
2674 | M | M.FspThrORF1852P (100% identity) | M.FspCORF2674P | |
2675 | 642 aa conserved hypothetical protein | |||
2727 | 181 aa hypothetical protein | |||
2728 | RM | FspThrORF2514P (99% identity) | FspCORF2728P | |
2729 | helicase-like | |||
2952 | serine/threonine protein kinase | |||
2953 | RM | FspThrORF3443P (100% identity) | FspCORF2953P | |
2954 | bacteriophage (phiC31) resistance gene PglY | |||
Type IV | ||||
ORF | Gene | Most similar | Specificity | Name |
155 | 321 aa hypothetical protein | |||
156 | R | 363 aa hypothetical protein | FspCMrrP | |
157 | Uncharacterized protein | |||
1122 | transposase | |||
1123 | R | FspThrMrr2P (100% identity) | FspCMrr2P | |
1124 | 300 aa hypothetical protein | |||
1131 | GCN5-related N-acetyltransferase | |||
1132 | R | FspThrMrr3P (65% identity) | FspCMrr3P | |
1133 | 104 aa hypothetical protein | |||
2838 | carbohydrate ABC transporter membrane protein 2, | |||
2839 | R | FspThrMcrCP (100% identity) | FspCMcrCP | |
2840 | R | FspThrMcrBP (100% identity) | FspCMcrBP | |
2841 | Zeta toxin |