Escherichia coli NDM_11.16372 |
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Putative Escherichia coli NDM_11.16372 RM systems
Ref: Manyahi,J. et al. unpublished
REBASE ref # 33391
| Sequence length: | GenBank #: | |
| Chromosome: | 4,890,086 bp | CP082129 |
| plasmid pIncFIA: | 136,961 bp | CP082130 |
REBASE acronym: Eco16372
Org_num: 53820
All begin K5P77_
| Type II | ||||
|---|---|---|---|---|
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| 1820 | cell division protein DamX | |||
| 1825 | M | M.UbaC1152DamP (100% identity) | GATC | M.Eco16372DamP |
| 1830 | ribulose-phosphate 3-epimerase | |||
| 2440 | IS5-like element IS903B family transposase | |||
| 2445 | M | M.Sso8ORF2545P (100% identity) | ATGCAT | M.Eco16372ORF2445P |
| 2450 | DNA-binding transcriptional regulator Fis | |||
| 7365 | helix-turn-helix domain-containing protein | |||
| 7370 | M | M.Kpn75ORF17070P (100% identity) | M.Eco16372ORF7370P | |
| 7375 | RusA family crossover junction | |||
| 9530 | phosphohydrolase | |||
| 9535 | M | M.EcosEC29DcmP (100% identity) | CCWGG | M.Eco16372DcmP |
| 9540 | V | V.SflFF64DcmP (100% identity) | CCWGG | V.Eco16372DcmP |
| 9545 | drug/metabolite exporter YedA | |||
| 18135 | zinc ribbon domain-containing protein | |||
| 18140 | M | M.EcosEC31ORF18555P (100% identity) | GGTACC | M.Eco16372ORF18140P |
| 18145 | tyrosine-type recombinase/integrase | |||
| 18375 | LexA family transcriptional regulator | |||
| 18380 | M | M.Sso8ORF17910P (100% identity) | GATC | M.Eco16372ORF18380P |
| 18385 | PerC family transcriptional regulator | |||
| 20215 | HNH endonuclease | |||
| 20220 | R | Sso8ORF19860P (100% identity) | Eco16372ORF20220P | |
| 20225 | 55 aa hypothetical protein | |||
| plasmid pIncFIA | ||||
| 23905 | 102 aa hypothetical protein | |||
| 23910 | M | M.KpnVA569ORF28145P (100% identity) | M.Eco16372ORF23910P | |
| 23915 | 73 aa hypothetical protein | |||
| Type IV | ||||
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| 18165 | DUF4113 domain-containing protein | |||
| 18170 | R | EcosEC29GmrSDP (100% identity) | Eco16372GmrSDP | |
| 18175 | recombinase family protein | |||