Escherichia coli L3452210II |
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Putative Escherichia coli L3452210II RM systems
Ref: Endimiani,A. et al. unpublished
REBASE ref # 32726
| Sequence length: | GenBank #: | |
| Chromosome: | 4,729,571 bp | CP076527 |
| plasmid pL3452210II_1: | 82,856 bp | CP076528 |
| plasmid pL3452210II_2: | 67,321 bp | CP076529 |
REBASE acronym: EcoL3452
Org_num: 50685
All begin KPE21_
| Type I | ||||
|---|---|---|---|---|
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| 520 | M | M.Sen64034II (100% identity) | AGCNNNNNCTTC | M.EcoL3452ORF520P |
| 525 | S | S.Sen64034II (100% identity) | AGCNNNNNCTTC | S.EcoL3452ORF520P |
| 530 | restriction system-associated AAA family ATPase | |||
| 20140 | IS1 family transposase | |||
| 20145 | S | S.Sen12509ORF5865P (62% identity) | S.EcoL3452ORF20150P | |
| 20150 | M | M.SenS688ORF13495P (100% identity) | M.EcoL3452ORF20150P | |
| 20155 | integrase core domain-containing protein | |||
| plasmid pL3452210II_2 | ||||
| 23585 | IS1-like element IS1A family transposase | |||
| 23590 | R | EcosR11ORF25685P (100% identity) | CAAYNNNNNCTGG | EcoL3452ORF23600P |
| 23595 | S | S.SenBR076ORFFP (100% identity) | CAAYNNNNNCTGG | S.EcoL3452ORF23600P |
| 23600 | M | M.KpnKPA1ORF26345P (100% identity) | CAAYNNNNNCTGG | M.EcoL3452ORF23600P |
| 23605 | type II toxin-antitoxin system Phd/YefM family | |||
| Type II | ||||
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| 800 | phosphohydrolase | |||
| 805 | M | M.EcosEC5DcmP (100% identity) | CCWGG | M.EcoL3452DcmP |
| 810 | V | V.EcosEC7DcmP (100% identity) | V.EcoL3452DcmP | |
| 815 | drug/metabolite exporter YedA | |||
| 6420 | phosphoadenosine phosphosulfate reductase family | |||
| 6425 | M | M.Eco3355ORF14930P (100% identity) | M.EcoL3452ORF6425P | |
| 6430 | TraR/DksA family transcriptional regulator | |||
| 9385 | 321 aa hypothetical protein | |||
| 9390 | R | Sso8033ORF3755P (100% identity) | EcoL3452ORF9395P | |
| 9395 | M | M.SflSTLE1ORF5615P (100% identity) | M.EcoL3452ORF9395P | |
| 9400 | 257 aa hypothetical protein | |||
| 16340 | cell division protein DamX | |||
| 16345 | M | M.UbaC1152DamP (100% identity) | GATC | M.EcoL3452DamP |
| 16350 | ribulose-phosphate 3-epimerase | |||
| 16965 | DUF2556 family protein | |||
| 16970 | M | M.Ssp28760ORF20045P (100% identity) | ATGCAT | M.EcoL3452ORF16970P |
| 16975 | DNA-binding transcriptional regulator Fis | |||
| plasmid pL3452210II_1 | ||||
| 23205 | TerB family tellurite resistance protein | |||
| 23220 | M | M.EcoUKDORF25705P (100% identity) | M.EcoL3452ORF23220P | |
| 23225 | recombination-associated protein RdgC | |||
| plasmid pL3452210II_2 | ||||
| 23490 | 73 aa hypothetical protein | |||
| 23495 | M | M.UbapRSB107ORFAP (100% identity) | SAY | M.EcoL3452ORF23495P |
| 23500 | 102 aa hypothetical protein | |||
| Type IV | ||||
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| 4730 | NADP-dependent isocitrate dehydrogenase | |||
| 4735 | R | EcosEC27McrCP (100% identity) | EcoL3452McrCP | |
| 4740 | R | EcoteDMcrBP (100% identity) | EcoL3452McrBP | |
| 4745 | recombinase family protein | |||