Escherichia coli PK8261 |
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Putative Escherichia coli PK8261 RM systems
Ref: Mohsin,M. et al. unpublished
REBASE ref # 31850
| Sequence length: | GenBank #: | |
| Chromosome: | 5,194,034 bp | CP080155 |
| plasmid pPK8261-180kb: | 180,318 bp | CP080157 |
| plasmid pPK8261-tetX: | 119,081 bp | CP080156 |
REBASE acronym: EcoPK8261
Org_num: 50717
All begin KZY07_
| Type I | ||||
|---|---|---|---|---|
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| 20610 | adenine/cytosine-specific restriction | |||
| 20615 | R | EcosS1ORF16790P (100% identity) | CCANNNNNNNCTTC | EcoPK8261ORF20620P |
| 20620 | M | M.EcosS1ORF16790P (100% identity) | CCANNNNNNNCTTC | M.EcoPK8261ORF20620P |
| 20625 | S | S.EcosS1ORF16790P (100% identity) | CCANNNNNNNCTTC | S.EcoPK8261ORF20620P |
| 20630 | endoribonuclease SymE | |||
| 22300 | type II toxin-antitoxin system RelB/DinJ family | |||
| 22305 | M | M.SenS0935ORF770P (99% identity) | ACYNNNNNNGTTC | M.EcoPK8261ORF22305P |
| 22310 | S | S.Ecos53ORF20340P (100% identity) | ACYNNNNNNGTTC | S.EcoPK8261ORF22305P |
| 22315 | R | EcoPK8276ORF23685P (100% identity) | ACYNNNNNNGTTC | EcoPK8261ORF22305P |
| 22320 | 184 aa hypothetical protein | |||
| Type II | ||||
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| 1895 | cell division protein DamX | |||
| 1900 | M | M.Ecos69DamP (100% identity) | GATC | M.EcoPK8261DamP |
| 1905 | ribulose-phosphate 3-epimerase | |||
| 2115 | 71 aa hypothetical protein | |||
| 2120 | M | M.EcoPK8275ORF4990P (100% identity) | M.EcoPK8261ORF2120P | |
| 2125 | helix-turn-helix domain-containing protein | |||
| 2710 | DUF2556 family protein | |||
| 2715 | M | M.Ecos69ORF20890P (100% identity) | ATGCAT | M.EcoPK8261ORF2715P |
| 2720 | DNA-binding transcriptional regulator Fis | |||
| 7005 | serine/threonine protein phosphatase | |||
| 7010 | M | M.EcoPK8275ORF9875P (100% identity) | M.EcoPK8261ORF7010P | |
| 7015 | PerC family transcriptional regulator | |||
| 9985 | phosphohydrolase | |||
| 9990 | M | M.Fnu048DcmP (100% identity) | CCWGG | M.EcoPK8261DcmP |
| 9995 | V | V.Ecostr9DcmP (74% identity) | V.EcoPK8261DcmP | |
| 10000 | drug/metabolite exporter YedA | |||
| 14260 | NinE family protein | |||
| 14265 | M | M.SflWW1ORF7070P (100% identity) | GATC | M.EcoPK8261ORF14265P |
| 14270 | recombination protein NinB | |||
| plasmid pPK8261-180kb | ||||
| 26445 | 73 aa hypothetical protein | |||
| 26450 | M | M.SflN92ORF24820P (100% identity) | M.EcoPK8261ORF26450P | |
| 26455 | 101 aa hypothetical protein | |||
| plasmid pPK8261-tetX | ||||
| 25495 | 102 aa hypothetical protein | |||
| 25500 | M | M.SenST46ORF25580P (100% identity) | M.EcoPK8261ORF25500P | |
| 25505 | 73 aa hypothetical protein | |||
| 25615 | 102 aa hypothetical protein | |||
| 25620 | M | M.SenST46ORF25580P (100% identity) | M.EcoPK8261ORF25620P | |
| 25625 | 73 aa hypothetical protein | |||
| Type III | ||||
| ORF | Gene | Most similar | Specificity | Name |
| plasmid pPK8261-tetX | ||||
| 25400 | 67 aa hypothetical protein | |||
| 25405 | M | M.SspS13ORF650P (100% identity) | M.EcoPK8261ORF25405P | |
| 25410 | R | SspS13ORF650P (100% identity) | EcoPK8261ORF25405P | |
| 25415 | tRNA modification GTPase | |||
| Type IV | ||||
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| 20605 | GTPase | |||
| 20610 | R | EcosS1MrrP (100% identity) | EcoPK8261MrrP | |
| 20615 | type I restriction-modification system | |||