Escherichia coli PK8276 |
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Putative Escherichia coli PK8276 RM systems
Ref: Mohsin,M. et al. unpublished
REBASE ref # 31850
| Sequence length: | GenBank #: | |
| Chromosome: | 4,944,641 bp | CP080146 |
| plasmid pPK8276-107kb: | 107,696 bp | CP080150 |
| plasmid pPK8276-110kb: | 110,377 bp | CP080149 |
REBASE acronym: EcoPK8276
Org_num: 50719
All begin KZY06_
| Type I | ||||
|---|---|---|---|---|
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| 16630 | AAA family ATPase | |||
| 16635 | S | S.SspZ54ORF5015P (100% identity) | TGANNNNNNCTTC | S.EcoPK8276ORF16640P |
| 16640 | M | M.SspZ54ORF5015P (100% identity) | TGANNNNNNCTTC | M.EcoPK8276ORF16640P |
| 16645 | R | SspZ54ORF5015P (100% identity) | TGANNNNNNCTTC | EcoPK8276ORF16640P |
| 16650 | transposase | |||
| 23670 | 184 aa hypothetical protein | |||
| 23675 | R | EcoPK8275ORF200P (100% identity) | ACYNNNNNNGTTC | EcoPK8276ORF23685P |
| 23680 | S | S.Ecos53ORF20340P (100% identity) | ACYNNNNNNGTTC | S.EcoPK8276ORF23685P |
| 23685 | M | M.SenS0935ORF770P (99% identity) | ACYNNNNNNGTTC | M.EcoPK8276ORF23685P |
| 23690 | type II toxin-antitoxin system RelB/DinJ family | |||
| Type II | ||||
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| 4850 | phosphohydrolase | |||
| 4855 | M | M.EcosEC29DcmP (100% identity) | CCWGG | M.EcoPK8276DcmP |
| 4860 | V | V.SflFF64DcmP (100% identity) | V.EcoPK8276DcmP | |
| 4865 | drug/metabolite exporter YedA | |||
| 20930 | cell division protein DamX | |||
| 20935 | M | M.UbaC1152DamP (100% identity) | GATC | M.EcoPK8276DamP |
| 20940 | ribulose-phosphate 3-epimerase | |||
| 21560 | DUF2556 family protein | |||
| 21565 | M | M.Ssp28760ORF20045P (100% identity) | ATGCAT | M.EcoPK8276ORF21565P |
| 21570 | DNA-binding transcriptional regulator Fis | |||
| plasmid pPK8276-107kb | ||||
| 25045 | 104 aa hypothetical protein | |||
| 25050 | M | M.SflP099ORF24190P (100% identity) | M.EcoPK8276ORF25050P | |
| 25055 | 73 aa hypothetical protein | |||
| Type III | ||||
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| 15300 | 100 aa hypothetical protein | |||
| 15305 | R | SflN116ORF19490P (100% identity) | GAACC | EcoPK8276ORF15310P |
| 15310 | M | M.SflN116ORF19490P (100% identity) | GAACC | M.EcoPK8276ORF15310P |
| 15315 | DEAD/DEAH box helicase family protein | |||
| Type IV | ||||
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| 13510 | retron Ec67 family RNA-directed DNA | |||
| 13515 | R | Eco668GmrSDP (100% identity) | EcoPK8276GmrSDP | |
| 13520 | DNA invertase | |||
| Orphan M | ||||
| ORF | Gene | Most similar | Specificity | Name |
| plasmid pPK8276-110kb | ||||
| 24745 | 76 aa hypothetical protein | |||
| 24750 | M | M.Sso524ORF460P (100% identity) | M.EcoPK8276ORF24750P | |
| 24755 | 269 aa hypothetical protein | |||