Escherichia coli M45 |
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Putative Escherichia coli M45 RM systems
Ref: Palkovicova,J. et al. unpublished
REBASE ref # 32716
Complete sequence: 5,185,411 bp
GenBank #: CP080119
REBASE acronym: EcoM45
Org_num: 50688
All begin KZX76_
| Type I | ||||
|---|---|---|---|---|
| ORF | Gene | Most similar | Specificity | Name |
| 10435 | endoribonuclease SymE | |||
| 10440 | R | Ecou021ORF19870P (100% identity) | RTACNNNNGTG | EcoM45ORF10450P |
| 10445 | S | S.Ecou021ORF19870P (100% identity) | RTACNNNNGTG | S.EcoM45ORF10450P |
| 10450 | M | M.Ecou021ORF19870P (100% identity) | RTACNNNNGTG | M.EcoM45ORF10450P |
| 10455 | restriction endonuclease | |||
| 12515 | ash family protein | |||
| 12520 | S | S.EcosS9ORF4930P (100% identity) | AAAGNNNNGTT | S.EcoM45ORF12525P |
| 12525 | M | M.EcosS9ORF4930P (99% identity) | AAAGNNNNGTT | M.EcoM45ORF12525P |
| 12530 | R | EcosS9ORF4930P (100% identity) | AAAGNNNNGTT | EcoM45ORF12525P |
| 12535 | type IV toxin-antitoxin system AbiEi family | |||
| Type II | ||||
| ORF | Gene | Most similar | Specificity | Name |
| 3880 | DNA-binding transcriptional regulator Fis | |||
| 3885 | M | M.PmeBin470ORFAP (100% identity) | ATGCAT | M.EcoM45ORF3885P |
| 3890 | DUF2556 family protein | |||
| 4480 | ribulose-phosphate 3-epimerase | |||
| 4485 | M | M.SspPIBDamP (100% identity) | GATC | M.EcoM45DamP |
| 4490 | cell division protein DamX | |||
| 6000 | BREX system P-loop protein BrxC | |||
| 6005 | RM | EcosR9ORF15335P (100% identity) | CANCATC | EcoM45ORF6005P |
| 6010 | BREX-1 system phosphatase PglZ type A | |||
| 10095 | helix-turn-helix domain-containing protein | |||
| 10100 | M | M2.EcosEC4ORF20110P (100% identity) | GGTCTC | M1.EcoM45ORF10100P |
| 10105 | M | M2.EcosS9ORF2810P (100% identity) | GGTCTC | M2.EcoM45ORF10100P |
| 10110 | R | EcosS9ORF2810P (100% identity) | GGTCTC | EcoM45ORF10100P |
| 10115 | McrC family protein | |||
| 10690 | 67 aa hypothetical protein | |||
| 10695 | M | M.Sso63633ORF22290P (100% identity) | M.EcoM45ORF10695P | |
| 10700 | phage lysis protein EssD | |||
| 16030 | 72 aa hypothetical protein | |||
| 16035 | M | M.KpnYN1ORFGP (89% identity) | M.EcoM45ORF16035P | |
| 16040 | helix-turn-helix domain-containing protein | |||
| 18265 | TrmB family transcriptional regulator | |||
| 18270 | M | M.EcosS9ORF10680P (100% identity) | A | M.EcoM45ORF18270P |
| 18285 | DUF3927 family protein | |||
| 21785 | drug/metabolite exporter YedA | |||
| 21790 | V | V.EcoTO148Dcm2P (100% identity) | V.EcoM45DcmP | |
| 21795 | M | M.EcosS9DcmP (100% identity) | CCWGG | M.EcoM45DcmP |
| 21800 | phosphohydrolase | |||
| Type IV | ||||
| ORF | Gene | Most similar | Specificity | Name |
| 10110 | Alw26I/Eco31I/Esp3I family type II restriction | |||
| 10115 | R | EcosS9McrCP (100% identity) | EcoM45McrCP | |
| 10120 | R | EcosS3McrBP (100% identity) | EcoM45McrBP | |
| 10125 | glycosyltransferase | |||