Escherichia coli EC45 |
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Putative Escherichia coli EC45 RM systems
Ref: Mahazu,S. et al. unpublished
REBASE ref # 32719
| Sequence length: | GenBank #: | |
| Chromosome: | 4,954,777 bp | CP059125 |
| plasmid pEc45_1: | 146,488 bp | CP059126 |
REBASE acronym: EcoEC45
Org_num: 50658
All begin H0X93_
| Type I | ||||
|---|---|---|---|---|
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| 16875 | transposase | |||
| 16880 | M | M.SenS688ORF13495P (100% identity) | ACAYNNNNCTG | M.EcoEC45ORF16880P |
| 16885 | S | S.Sen12509ORF5865P (100% identity) | ACAYNNNNCTG | S.EcoEC45ORF16880P |
| 16890 | R | Sen12509ORF5865P (100% identity) | ACAYNNNNCTG | EcoEC45ORF16880P |
| 16895 | IS1 family transposase | |||
| 21315 | 272 aa hypothetical protein | |||
| 21320 | S | S.Sma1978ORFBP (77% identity) | S.EcoEC45ORF21320P | |
| 21325 | DNA binding domain-containing protein | |||
| 21330 | histidinol-phosphatase | |||
| 21335 | R | Sma1978ORFBP (100% identity) | EcoEC45ORF21320P | |
| 21340 | helix-turn-helix domain-containing protein | |||
| Type II | ||||
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| 20 | 68 aa hypothetical protein | |||
| 25 | M | M.EcosE2ORF21575P (100% identity) | M.EcoEC45ORF25P | |
| 30 | 341 aa hypothetical protein | |||
| 12920 | drug/metabolite exporter YedA | |||
| 12925 | V | V.SsoSE61DcmP (100% identity) | V.EcoEC45DcmP | |
| 12930 | M | M.SflSTLE1DcmP (100% identity) | CCWGG | M.EcoEC45DcmP |
| 12935 | phosphohydrolase | |||
| 20025 | DNA-binding transcriptional regulator Fis | |||
| 20030 | M | M.Ssp28760ORF20045P (100% identity) | ATGCAT | M.EcoEC45ORF20030P |
| 20035 | DUF2556 family protein | |||
| 20650 | ribulose-phosphate 3-epimerase | |||
| 20655 | M | M.UbaC1152DamP (100% identity) | GATC | M.EcoEC45DamP |
| 20660 | cell division protein DamX | |||
| plasmid pEc45_1 | ||||
| 24500 | 73 aa hypothetical protein | |||
| 24505 | M | M.KpnVA569ORF28145P (100% identity) | M.EcoEC45ORF24505P | |
| 24510 | 102 aa hypothetical protein | |||
| Type IV | ||||
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| 8880 | recombinase family protein | |||
| 8885 | R | EcoteDMcrBP (100% identity) | EcoEC45McrBP | |
| 8890 | R | EcosEC27McrCP (100% identity) | EcoEC45McrCP | |
| 8895 | isocitrate dehydrogenase | |||
| Orphan M | ||||
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| 7320 | TraR/DksA family transcriptional regulator | |||
| 7325 | M | M.Sen663ORF16605P (100% identity) | GATC | M.EcoEC45ORF7325P |
| 7330 | replication endonuclease | |||