Escherichia coli E148 |
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Putative Escherichia coli E148 RM systems
Ref: Tamamura,Y. et al. unpublished
REBASE ref # 32717
| Sequence length: | GenBank #: | |
| Chromosome: | 4,971,834 bp | AP024518 |
| plasmid pE148-1: | 100,617 bp | AP024519 |
| plasmid pE148-2: | 99,051 bp | AP024520 |
REBASE acronym: EcoE148
Org_num: 50651
All begin NIAHE148_
| Type I | ||||
|---|---|---|---|---|
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| 45720 | endoribonuclease SymE | |||
| 45730 | R | EcosEC9ORF12765P (100% identity) | GACNNNNNTRRG | EcoE148ORF45750P |
| 45740 | S | S.EcosEC9ORF12765P (100% identity) | GACNNNNNTRRG | S.EcoE148ORF45750P |
| 45750 | M | M.Esp9308ORFIP (100% identity) | GACNNNNNTRRG | M.EcoE148ORF45750P |
| 45760 | 388 aa hypothetical protein | |||
| plasmid pE148-2 | ||||
| 48330 | 73 aa hypothetical protein | |||
| 48340 | M | M.EcoE189ORF47290P (100% identity) | ACANNNNNNNTTAC | M.EcoE148ORF48340P |
| 48350 | S | S.EcoE189ORF47290P (100% identity) | ACANNNNNNNTTAC | S.EcoE148ORF48340P |
| 48360 | R | EcoE189ORF47290P (100% identity) | ACANNNNNNNTTAC | EcoE148ORF48340P |
| 48370 | 168 aa hypothetical protein | |||
| Type II | ||||
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| 3260 | 59 aa hypothetical protein | |||
| 3270 | M | M.Ecos67ORF8885P (100% identity) | M.EcoE148ORF3270P | |
| 3280 | R | Ecos67ORF8885P (100% identity) | EcoE148ORF3270P | |
| 3290 | 253 aa hypothetical protein | |||
| 8730 | 75 aa hypothetical protein | |||
| 8740 | M | M.EcoW113ORFIP (100% identity) | GATC | M.EcoE148ORF8740P |
| 8750 | replication endonuclease from | |||
| 19690 | inner membrane transporter YedA | |||
| 19700 | V | V.SsoSE61DcmP (100% identity) | V.EcoE148DcmP | |
| 19710 | M | M.SflSTLE1DcmP (100% identity) | CCWGG | M.EcoE148DcmP |
| 19720 | phosphohydrolase | |||
| 33500 | DNA-binding protein Fis | |||
| 33510 | M | M.Ssp28760ORF20045P (100% identity) | ATGCAT | M.EcoE148ORF33510P |
| 33520 | acrEF/envCD operon repressor | |||
| 34620 | ribulose-phosphate 3-epimerase | |||
| ??? | M | M.UbaC1152DamP (100% identity) | GATC | M.EcoE148DamP |
| 34640 | cell division protein DamX | |||
| 44920 | surface composition regulator | |||
| 44930 | R | SflN107ORF20240P (100% identity) | EcoE148ORF44930P | |
| 44940 | conjugal transfer protein TraG | |||
| 45370 | 332 aa hypothetical protein | |||
| 45380 | R | EcosEC9ORF12570P (100% identity) | EcoE148ORF45380P | |
| 45390 | 252 aa hypothetical protein | |||
| plasmid pE148-1 | ||||
| 46520 | 73 aa hypothetical protein | |||
| 46530 | M | M.EcoY18JORF350P (100% identity) | M.EcoE148ORF46530P | |
| 46540 | plasmid stability protein StbA | |||
| plasmid pE148-2 | ||||
| 47570 | 311 aa hypothetical protein | |||
| 47580 | M | M.EcoE189ORF46540P (100% identity) | M.EcoE148ORF47580P | |
| 47590 | recombination-associated protein RdgC | |||