Escherichia coli FDAARGOS 1383 |
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Putative Escherichia coli FDAARGOS 1383 RM systems
Ref: Walk,S. et al. unpublished
REBASE ref # 32723
| Sequence length: | GenBank #: | |
| Chromosome: | 4,973,087 bp | CP077396 |
| plasmid unnamed: | 82,810 bp | CP077397 |
REBASE acronym: Eco1383a
Org_num: 50669
All begin I6L13_
| Type I | ||||
|---|---|---|---|---|
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| 6570 | 120 aa hypothetical protein | |||
| 6575 | M | M1.SspPIBORF19375P (100% identity) | M1.Eco1383aORF6575P | |
| 6580 | M | M2.SspPIBORF19375P (100% identity) | M2.Eco1383aORF6575P | |
| 6585 | S | S.SspPIBORF19375P (100% identity) | S.Eco1383aORF6575P | |
| 6590 | R | SspPIBORF19375P (100% identity) | Eco1383aORF6575P | |
| 6595 | N-6 DNA methylase | |||
| 6785 | 237 aa hypothetical protein | |||
| 6790 | R | Ecos135ORF4680P (100% identity) | Eco1383aORF6800P | |
| 6795 | S | S.Ecos135ORF4680P (100% identity) | S.Eco1383aORF6800P | |
| 6800 | M | M.Ecos135ORF4680P (100% identity) | M.Eco1383aORF6800P | |
| 6805 | DUF262 domain-containing protein | |||
| Type II | ||||
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| 1260 | DNA-binding transcriptional regulator Fis | |||
| 1265 | M | M.Fnu048ORFDP (100% identity) | ATGCAT | M.Eco1383aORF1265P |
| 1270 | DUF2556 family protein | |||
| 1790 | ribulose-phosphate 3-epimerase | |||
| 1795 | M | M.SspPIBDamP (100% identity) | GATC | M.Eco1383aDamP |
| 1800 | cell division protein DamX | |||
| 8870 | integrase domain-containing protein | |||
| 8875 | M | M.Fnu048DndBP (98% identity) | M.Eco1383aDndBP | |
| 8880 | DNA phosphorothioation system sulfurtransferase | |||
| 8875 | DNA sulfur modification protein DndB | |||
| 8880 | M | M.Fnu048DndCP (100% identity) | M.Eco1383aDndCP | |
| 8885 | DNA sulfur modification protein DndD | |||
| 8880 | DNA phosphorothioation system sulfurtransferase | |||
| 8885 | M | M.Fnu048DndDP (100% identity) | M.Eco1383aDndDP | |
| 8890 | DNA sulfur modification protein DndE | |||
| 8885 | DNA sulfur modification protein DndD | |||
| 8890 | M | M.Fnu048DndEP (100% identity) | M.Eco1383aDndEP | |
| 8895 | DGQHR domain-containing protein | |||
| 8900 | 179 aa hypothetical protein | |||
| 8905 | R | Fnu048DptHP (100% identity) | Eco1383aDptHP | |
| 8910 | DNA phosphorothioation-dependent restriction | |||
| 8910 | DNA phosphorothioation-dependent restriction | |||
| 8915 | R | Fnu048DptFP (100% identity) | Eco1383aDptFP | |
| 8920 | helix-turn-helix domain-containing protein | |||
| 8910 | R | Fnu048DptGP (100% identity) | Eco1383aDptGP | |
| 8915 | DNA phosphorothioation-dependent restriction | |||
| 11390 | PerC family transcriptional regulator | |||
| 11395 | M | M.Eco1382ORF18955P (100% identity) | GATC | M.Eco1383aORF11395P |
| 11400 | LexA family transcriptional regulator | |||
| 14745 | 81 aa hypothetical protein | |||
| 14750 | M | M.Ecos15739ORF2910P (100% identity) | M.Eco1383aORF14750P | |
| 14755 | 329 aa hypothetical protein | |||
| 14760 | R | Ecos15739ORF2910P (100% identity) | Eco1383aORF14750P | |
| 14765 | DUF1367 family protein | |||
| 18075 | drug/metabolite exporter YedA | |||
| 18080 | V | V.SflFF64DcmP (100% identity) | V.Eco1383aDcmP | |
| 18085 | M | M.Eco3200DcmP (100% identity) | CCWGG | M.Eco1383aDcmP |
| 18090 | phosphohydrolase | |||
| plasmid unnamed | ||||
| 23760 | IS110 family transposase | |||
| 23765 | M | M.Eco1382ORF23990P (100% identity) | M.Eco1383aORF23765P | |
| 23770 | 73 aa hypothetical protein | |||
| Type IV | ||||
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| 6800 | type I restriction-modification system subunit | |||
| 6805 | R | EcoTHYM1GmrSDP (100% identity) | Eco1383aGmrDP | |
| 6810 | cell filamentation protein Fic | |||