Escherichia coli FDAARGOS 1386 |
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Putative Escherichia coli FDAARGOS 1386 RM systems
Ref: Walk,S. et al. unpublished
REBASE ref # 32723
| Sequence length: | GenBank #: | |
| Chromosome: | 5,044,147 bp | CP077294 |
| plasmid unnamed1: | 133,266 bp | CP077295 |
REBASE acronym: Eco1386a
Org_num: 50670
All begin I6L16_
| Type I | ||||
|---|---|---|---|---|
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| 5740 | 60 aa hypothetical protein | |||
| 5745 | R | EcoW004ORF12170P (100% identity) | Eco1386aORF5760P | |
| 5750 | S | S.Mmo48659ORF2735P (100% identity) | S.Eco1386aORF5760P | |
| 5755 | AAA family ATPase | |||
| 5760 | M | M.Mmo48659ORF2735P (100% identity) | M.Eco1386aORF5760P | |
| 5765 | IS110-like element ISEc20 family transposase | |||
| 12930 | endoribonuclease SymE | |||
| 12935 | S | S.EcosS1ORF16790P (100% identity) | CCANNNNNNNCTTC | S.Eco1386aORF12940P |
| 12940 | M | M.Ecoppa1ORF6185P (100% identity) | CCANNNNNNNCTTC | M.Eco1386aORF12940P |
| 12945 | R | EcosS1ORF16790P (99% identity) | CCANNNNNNNCTTC | Eco1386aORF12940P |
| 12950 | adenine/cytosine-specific restriction | |||
| Type II | ||||
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| 2965 | LexA family transcriptional regulator | |||
| 2970 | M | M.EcoY26ORF4515P (100% identity) | GATC | M.Eco1386aORF2970P |
| 2975 | PerC family transcriptional regulator | |||
| 6765 | DNA-binding transcriptional regulator Fis | |||
| 6770 | M | M.PmeBin470ORFAP (100% identity) | ATGCAT | M.Eco1386aORF6770P |
| 6775 | DUF2556 family protein | |||
| 7365 | ribulose-phosphate 3-epimerase | |||
| 7370 | M | M.SspPIBDamP (100% identity) | GATC | M.Eco1386aDamP |
| 7375 | cell division protein DamX | |||
| 12680 | 59 aa hypothetical protein | |||
| 12685 | R | Ecoi127aORF4076P (100% identity) | Eco1386aORF12685P | |
| 12690 | HNH endonuclease | |||
| 17540 | TraR/DksA family transcriptional regulator | |||
| 17545 | M | M.EcoE41ORF15730P (100% identity) | GATC | M.Eco1386aORF17545P |
| 17550 | replication endonuclease | |||
| 20075 | TrmB family transcriptional regulator | |||
| 20080 | M | M.SboBSORF1444P (100% identity) | A | M.Eco1386aORF20080P |
| 20100 | DUF1737 domain-containing protein | |||
| 23355 | drug/metabolite exporter YedA | |||
| 23360 | V | V.EcosC25DcmP (100% identity) | V.Eco1386aDcmP | |
| 23365 | M | M.SflC32DcmP (100% identity) | CCWGG | M.Eco1386aDcmP |
| 23370 | phosphohydrolase | |||
| plasmid unnamed1 | ||||
| 25105 | 73 aa hypothetical protein | |||
| 25110 | M | M.Sfl2142ORF380P (100% identity) | M.Eco1386aORF25110P | |
| 25115 | 103 aa hypothetical protein | |||
| Type IV | ||||
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| 2765 | DinI-like family protein | |||
| 2770 | R | EspFAAGmrSDP (100% identity) | Eco1386aGmrSDP | |
| 2775 | recombinase family protein | |||
| 12945 | type I restriction-modification system | |||
| 12950 | R | EcosS1MrrP (100% identity) | Eco1386aMrrP | |
| 12955 | GTPase | |||
| Orphan M | ||||
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| 19220 | recombination protein NinB | |||
| 19225 | M | M.EcosC25ORF16305P (100% identity) | GATC | M.Eco1386aORF19225P |
| 19230 | NinE family protein | |||