Escherichia coli FDAARGOS_1381 |
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Putative Escherichia coli FDAARGOS_1381 RM systems
Ref: Walk,S. et al. unpublished
REBASE ref # 32723
Complete sequence: 5,170,409 bp
GenBank #: CP077250
REBASE acronym: Eco1381
Org_num: 50676
All begin I6L11_
| Type I | ||||
|---|---|---|---|---|
| ORF | Gene | Most similar | Specificity | Name |
| 12985 | M48 family metallopeptidase | |||
| 12990 | R | Ecos142ORF9685P (100% identity) | GATGNNNNNNTAC | Eco1381ORF13010P |
| 12995 | cold shock domain-containing protein | |||
| 13000 | YecA family protein | |||
| 13005 | S | S.Ecos142ORF9685P (100% identity) | GATGNNNNNNTAC | S.Eco1381ORF13010P |
| 13010 | M | M.Ecos142ORF9685P (100% identity) | GATGNNNNNNTAC | M.Eco1381ORF13010P |
| 13015 | IS3 family transposase | |||
| Type II | ||||
| ORF | Gene | Most similar | Specificity | Name |
| 1045 | integrase | |||
| 1050 | M | M.SflFF80ORF21000P (100% identity) | YGGCCR | M.Eco1381ORF1050P |
| 1055 | R | SflFF80ORF21000P (100% identity) | YGGCCR | Eco1381ORF1050P |
| 1060 | transposase | |||
| 4060 | PerC family transcriptional regulator | |||
| 4065 | M | M.EcoNIH1ORF1465P (100% identity) | GATC | M.Eco1381ORF4065P |
| 4070 | LexA family transcriptional regulator | |||
| 4100 | 67 aa hypothetical protein | |||
| 4105 | M | M.SflN107ORF17955P (100% identity) | M.Eco1381ORF4105P | |
| 4110 | phage holin, lambda family | |||
| 9535 | TrmB family transcriptional regulator | |||
| 9540 | M | M.SsoL4094ORF17545P (100% identity) | A | M.Eco1381ORF9540P |
| 9555 | DUF3927 family protein | |||
| 13270 | drug/metabolite exporter YedA | |||
| 13275 | V | V.Ecos142DcmP (100% identity) | V.Eco1381DcmP | |
| 13280 | M | M.Ecos142DcmP (100% identity) | CCWGG | M.Eco1381DcmP |
| 13285 | phosphohydrolase | |||
| 16535 | PerC family transcriptional regulator | |||
| 16540 | M | M.SspPIBORF6330P (100% identity) | M.Eco1381ORF16540P | |
| 16545 | DUF1382 family protein | |||
| 20905 | DNA-binding transcriptional regulator Fis | |||
| 20910 | M | M.Ecos142ORF2405P (100% identity) | ATGCAT | M.Eco1381ORF20910P |
| 20915 | DUF2556 family protein | |||
| 21435 | ribulose-phosphate 3-epimerase | |||
| 21440 | M | M.SspPIBDamP (100% identity) | GATC | M.Eco1381DamP |
| 21445 | cell division protein DamX | |||
| Type III | ||||
| ORF | Gene | Most similar | Specificity | Name |
| 2175 | DEAD/DEAH box helicase family protein | |||
| 2180 | M | M.SflN116ORF19490P (100% identity) | GAACC | M.Eco1381ORF2180P |
| 2185 | R | SflN116ORF19490P (100% identity) | GAACC | Eco1381ORF2180P |
| 2190 | 100 aa hypothetical protein | |||