Escherichia coli XJW9B263 |
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Putative Escherichia coli XJW9B263 RM systems
Ref: He,W.Y. et al. Zool Res 42 (4), 461-468 (2021)
REBASE ref # 32739
| Sequence length: | GenBank #: | |
| Chromosome: | 4,816,940 bp | CP067399 |
| plasmid pXJW9B263-1: | 138,776 bp | CP067400 |
| plasmid pXJW9B263-2: | 96,022 bp | CP067401 |
REBASE acronym: EcoB263
Org_num: 50765
All begin JJF91_
| Type I | ||||
|---|---|---|---|---|
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| 19955 | DUF4942 domain-containing protein | |||
| 19960 | M | M.SflN110ORF19045P (100% identity) | CCANNNNNNNNTGAA | M.EcoB263ORF19960P |
| ??? | S | S.SflN110ORF19045P (99% identity) | CCANNNNNNNNTGAA | S.EcoB263ORF19960P |
| 19975 | R | SflN110ORF19045P (100% identity) | CCANNNNNNNNTGAA | EcoB263ORF19960P |
| 19980 | 52 aa hypothetical protein | |||
| plasmid pXJW9B263-1 | ||||
| 23245 | IS3 family transposase | |||
| 23250 | R | SflSTLE3ORF22785P (100% identity) | EcoB263ORF23265P | |
| 23255 | DUF4268 domain-containing protein | |||
| 23260 | S | S.SflSTLE3ORF22785P (100% identity) | S.EcoB263ORF23265P | |
| 23265 | M | M.SflSTLE3ORF22785P (100% identity) | M.EcoB263ORF23265P | |
| 23270 | SPFH/Band 7/PHB domain protein | |||
| Type II | ||||
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| 1600 | cell division protein DamX | |||
| 1605 | M | M.UbaC1152DamP (100% identity) | GATC | M.EcoB263DamP |
| 1610 | ribulose-phosphate 3-epimerase | |||
| 2215 | DUF2556 family protein | |||
| 2220 | M | M.Sso8ORF2545P (100% identity) | ATGCAT | M.EcoB263ORF2220P |
| 2225 | DNA-binding transcriptional regulator Fis | |||
| 5275 | TraR/DksA family transcriptional regulator | |||
| 5280 | M | M.SflLIN17ORF14475P (100% identity) | GATC | M.EcoB263ORF5280P |
| 5285 | replication endonuclease | |||
| 9360 | phosphohydrolase | |||
| 9365 | M | M.SflN92DcmP (100% identity) | CCWGG | M.EcoB263DcmP |
| 9370 | V | V.SsoSE61DcmP (100% identity) | V.EcoB263DcmP | |
| 9375 | drug/metabolite exporter YedA | |||
| 11370 | DUF977 family protein | |||
| ??? | M | M.SsoSE61ORF20220P (100% identity) | M.EcoB263ORF11375P | |
| 11380 | IS66-like element ISEc22 family transposase | |||
| 18025 | phage lysis protein EssD | |||
| 18030 | M | M.SflN116ORF17735P (100% identity) | M.EcoB263ORF18030P | |
| 18035 | 67 aa hypothetical protein | |||
| 18040 | AAA family ATPase | |||
| 18045 | M | M.SflN116ORF17750P (100% identity) | M.EcoB263ORF18045P | |
| 18050 | antitermination protein | |||
| 18070 | LexA family transcriptional regulator | |||
| 18075 | M | M.Sso90ORF15820P (100% identity) | GATC | M.EcoB263ORF18075P |
| 18080 | PerC family transcriptional regulator | |||
| 19935 | HNH endonuclease | |||
| 19940 | R | SflSTLE4ORF19250P (100% identity) | EcoB263ORF19940P | |
| 19945 | McrC family protein | |||
| 20310 | sigma 54-interacting transcriptional regulator | |||
| 20315 | R | SflFF87ORF20150P (100% identity) | EcoB263ORF20315P | |
| 20320 | IS21-like element IS100 family transposase | |||
| plasmid pXJW9B263-2 | ||||
| 24485 | SPFH/Band 7/PHB domain protein | |||
| 24500 | M | M.Sen94620ORF28085P (100% identity) | M.EcoB263ORF24500P | |
| 24505 | recombination-associated protein RdgC | |||
| Type IV | ||||
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| 19940 | HNH endonuclease | |||
| 19945 | R | SflSTLE4McrCP (100% identity) | EcoB263McrCP | |
| 19950 | R | SflSTLE4McrBP (100% identity) | EcoB263McrBP | |
| 19955 | DUF4942 domain-containing protein | |||