Escherichia coli MSI001 |
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Putative Escherichia coli MSI001 RM systems
Ref: Jiang,Y. unpublished
REBASE ref # 27749
Complete sequence: 5,013,406 bp
GenBank #: CP076645
REBASE acronym: EcoMSI001
Org_num: 50692
All begin KP725_
| Type I | ||||
|---|---|---|---|---|
| ORF | Gene | Most similar | Specificity | Name |
| 15430 | adenosine deaminase | |||
| 15435 | M | M.Eco41C14ORF20990P (99% identity) | CNACNNNNNCTGG | M.EcoMSI001II |
| 15440 | S | S.SenBR076ORFFP (79% identity) | CNACNNNNNCTGG | S.EcoMSI001II |
| 15445 | R | EcoC11ORF5P (98% identity) | CNACNNNNNCTGG | EcoMSI001IIP |
| 15450 | 105 aa hypothetical protein | |||
| Type II | ||||
| ORF | Gene | Most similar | Specificity | Name |
| 1675 | cell division protein DamX | |||
| 1680 | M | M.SspPIBDamP (100% identity) | GATC | M.EcoMSI001DamP |
| 1685 | ribulose-phosphate 3-epimerase | |||
| 2315 | DUF2556 family protein | |||
| 2320 | M | M.Ssp28760ORF20045P (100% identity) | ATGCAT | M.EcoMSI001ORF2320P |
| 2325 | DNA-binding transcriptional regulator Fis | |||
| 6205 | Com family DNA-binding transcriptional | |||
| 6210 | M | M.SenYU39ORF1896P (62% identity) | M.EcoMSI001ORF6210AP | |
| 6215 | IS66 family insertion sequence hypothetical | |||
| 6220 | IS66 family insertion sequence element accessory | |||
| 6225 | IS66 family transposase | |||
| 6230 | M | M.SenYU39ORF1896P (30% identity) | M.EcoMSI001ORF6210BP | |
| 6235 | ribosome-associated translation inhibitor RaiA | |||
| 9045 | replication endonuclease | |||
| 9050 | R | EcoS207ORF22790P (99% identity) | TGGCCA | EcoMSI001IP |
| 9055 | M | M.EcoS207ORF22790P (100% identity) | TGGCCA | M.EcoMSI001I |
| 9060 | phage portal protein | |||
| 9880 | phosphohydrolase | |||
| 9885 | M | M.EcoP3DcmP (100% identity) | CCWGG | M.EcoMSI001DcmP |
| 9890 | V | V.EcoSFE8DcmP (100% identity) | V.EcoMSI001DcmP | |
| 9895 | drug/metabolite exporter YedA | |||
| 17880 | 343 aa hypothetical protein | |||
| 17885 | M | M.EcoGR02AORF9240P (100% identity) | M.EcoMSI001ORF17885P | |
| 17890 | phage replication protein | |||
| 19280 | LexA family transcriptional regulator | |||
| 19285 | M | M.EcoS30ORF19345P (100% identity) | GATC | M.EcoMSI001ORF19285P |
| 19290 | PerC family transcriptional regulator | |||