Salmonella enterica subsp. enterica serovar Senftenberg CFSAN001066 |
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Putative Salmonella enterica subsp. enterica serovar Senftenberg CFSAN001066 RM systems
Ref: Hoffmann,M. et al. unpublished
REBASE ref # 32354
Complete sequence: 4,992,178 bp
GenBank #: CP074591
REBASE acronym: Sen01066
Org_num: 51620
All begin AIU08_
| Type I | ||||
|---|---|---|---|---|
| ORF | Gene | Most similar | Specificity | Name |
| 20560 | restriction endonuclease | |||
| 20565 | R | Sen80013ORF39990P (100% identity) | CNGANNNNNNNNTGCG | Sen01066ORF20570P |
| 20570 | M | M.Sen80013ORF39990P (100% identity) | CNGANNNNNNNNTGCG | M.Sen01066ORF20570P |
| 20575 | S | S.SenSW70ORF19425P (100% identity) | CNGANNNNNNNNTGCG | S.Sen01066ORF20570P |
| 20580 | endoribonuclease SymE | |||
| Type II | ||||
| ORF | Gene | Most similar | Specificity | Name |
| 1770 | cell division protein DamX | |||
| 1775 | M | M.StyTDamP (100% identity) | GATC | M.Sen01066DamP |
| 1780 | ribulose-phosphate 3-epimerase | |||
| 2260 | DUF2556 family protein | |||
| 2265 | M | M.Sen80013ORF4570P (100% identity) | ATGCAT | M.Sen01066ORF2265P |
| 2270 | tyrosine-type recombinase/integrase | |||
| 3265 | DUF3850 domain-containing protein | |||
| 3270 | M | M.SenS1602ORF3445P (100% identity) | M.Sen01066ORF3270P | |
| 3275 | replication endonuclease | |||
| 5610 | IS66 family transposase | |||
| 5615 | RM | Sma1978ORFHP (99% identity) | CTTGAC | Sen01066ORF5615P |
| 5620 | DEAD/DEAH box helicase | |||
| 6110 | DUF4060 family protein | |||
| 6115 | M | M.Sens24152ORF5710P (100% identity) | GATC | M.Sen01066ORF6115P |
| 6120 | YqaJ viral recombinase family protein | |||
| 7365 | DUF4222 domain-containing protein | |||
| 7370 | M | M1.SenRM074ORF7060P (100% identity) | M1.Sen01066ORF7370P | |
| 7375 | TraR/DksA family transcriptional regulator | |||
| 7380 | M | M2.SenRM074ORF7060P (100% identity) | M2.Sen01066ORF7370P | |
| 7385 | 55 aa hypothetical protein | |||
| 14155 | drug/metabolite exporter YedA | |||
| 14160 | V | V.StyUK1DcmP (100% identity) | V.Sen01066DcmP | |
| 14165 | M | M.SspZ69DcmP (100% identity) | CCWGG | M.Sen01066DcmP |
| 14170 | phosphohydrolase | |||
| 20710 | TnsA endonuclease N-terminal domain-containing | |||
| 20715 | R | Sen25331ORF25320P (100% identity) | Sen01066ORF20715P | |
| 20720 | 64 aa hypothetical protein | |||
| Type III | ||||
| ORF | Gene | Most similar | Specificity | Name |
| 5770 | Cd(II)/Pb(II)-responsive transcriptional | |||
| 5775 | M | M.Sen5006ORF16245P (100% identity) | M.Sen01066ORF5775P | |
| 5780 | R | Sen80013ORF11280P (100% identity) | Sen01066ORF5775P | |
| 5785 | inovirus Gp2 family protein | |||
| 18060 | 33 aa hypothetical protein | |||
| 18065 | R | Sen80013ORF35070P (100% identity) | CAGAG | Sen01066ORF18070P |
| 18070 | M | M.SenSW70ORF17195P (100% identity) | CAGAG | M.Sen01066ORF18070P |
| 18075 | MFS transporter | |||
| Type IV | ||||
| ORF | Gene | Most similar | Specificity | Name |
| 20555 | BrnT family toxin | |||
| 20560 | R | StyTMrrP (100% identity) | Sen01066MrrP | |
| 20565 | type I restriction-modification system | |||