Escherichia coli JA0072 |
| [index] - [schematics] - [save as Word doc] |
|
|
|
Putative Escherichia coli JA0072 RM systems
Ref: Wang,J. and Arthur,J. unpublished
REBASE ref # 32140
Complete sequence: 5,030,087 bp
GenBank #: CP070227
REBASE acronym: Eco0072
Org_num: 48251
All begin JS570_
| Type I | ||||
|---|---|---|---|---|
| ORF | Gene | Most similar | Specificity | Name |
| 3245 | NADPH-dependent aldehyde reductase Ahr | |||
| 3255 | R | EcosA33IP (100% identity) | Eco0072ORF3275P | |
| 3260 | S | S.EcosA4I (40% identity) | S2.Eco0072ORF3275P | |
| 3265 | IS110-like element ISEc45 family transposase | |||
| 3270 | S | S1.EcoNC101ORF3275P (100% identity) | S1.Eco0072ORF3275P | |
| 3275 | M | M.EcosA4I (100% identity) | M.Eco0072ORF3275P | |
| 3280 | DUF4942 domain-containing protein | |||
| 3530 | endoribonuclease SymE | |||
| 3535 | R | EcosA4IIP (100% identity) | GATANNNNNNTCC | Eco0072ORF3545P |
| 3540 | S | S.EcosA4II (100% identity) | GATANNNNNNTCC | S.Eco0072ORF3545P |
| ??? | M | M.EcoS1267ORF20885P (100% identity) | GATANNNNNNTCC | M.Eco0072ORF3545P |
| 3550 | restriction endonuclease | |||
| Type II | ||||
| ORF | Gene | Most similar | Specificity | Name |
| 3290 | McrC family protein | |||
| 3295 | R | EcosA4ORF22115P (100% identity) | Eco0072ORF3295P | |
| 3300 | HNH endonuclease | |||
| 8200 | TraR/DksA family transcriptional regulator | |||
| 8205 | M | M.EcoZ01ORF1668P (100% identity) | GATC | M.Eco0072ORF8205P |
| 8210 | replication endonuclease | |||
| 14120 | drug/metabolite exporter YedA | |||
| 14125 | V | V.EcosA4DcmP (100% identity) | V.Eco0072DcmP | |
| 14130 | M | M.EcosA33DcmP (100% identity) | CCWGG | M.Eco0072DcmP |
| 14135 | phosphohydrolase | |||
| 21340 | DNA-binding transcriptional regulator Fis | |||
| 21345 | M | M.PmeBin470ORFAP (100% identity) | ATGCAT | M.Eco0072ORF21345P |
| 21350 | DUF2556 family protein | |||
| 21940 | ribulose-phosphate 3-epimerase | |||
| 21945 | M | M.SspPIBDamP (100% identity) | GATC | M.Eco0072DamP |
| 21950 | cell division protein DamX | |||
| Type IV | ||||
| ORF | Gene | Most similar | Specificity | Name |
| 3280 | DUF4942 domain-containing protein | |||
| 3285 | R | EcosA4McrBP (100% identity) | Eco0072McrBP | |
| 3290 | R | EcosA4McrCP (100% identity) | Eco0072McrCP | |
| 3295 | HNH endonuclease | |||